KEGG   Mangifera indica (mango): 123221109
Entry
123221109         CDS       T07684                                 
Name
(RefSeq) uncharacterized protein LOC123221109
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
minc  Mangifera indica (mango)
Pathway
minc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123221109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:minc03041]
    123221109
Spliceosome [BR:minc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    123221109
 Complex B
    123221109
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11 RRM_9
Other DBs
NCBI-GeneID: 123221109
NCBI-ProteinID: XP_044499747
LinkDB
Position
7:16871301..16881525
AA seq 974 aa
MSRSGQKKEKYGSSDLSLDNCNDGTAARTRPLSFHEIIIRRKNKKSPEEIKEAARGSENK
SGDCTIENVSDHRESERHHKHNIDSSDGVDKHFSEGVVKLDSQGKEDTIPPNGSNSVRRD
RERRESEKKIRDDSLPKHKHREVLRSEIRLKDGSLAKENNTGESCRSEIKLKAEMKEKFT
KDKGKVDKQILGLGKNYEWPSENSKDVAVKKHSRDLTGKDRHEGRSGEKSERESKRKHRS
GNDEKNGDGNAVKKHDLGKRRDSEISERRERKESQKSHYGESRLKRMRSRSREREERNRR
LSISVSPKAHRHTSYHGREHEELFAHSSKGRSGRHHSDIDRSRGTSNGSNNHYSRWHGGS
TSGLGGYSPRKRRTDAAVKTPSPVSHSPEKKSAKWDVAPSDSNTVSDPVPSTFQMSNQNA
SVNADELVRATSLTSSEVKPLDVASVSASLTRQNISIYSHQLTQATKPLRSLYVDNVPAS
VSEKAVIEFLNNFLLSSGADQIRGSQPCISCVIQKDKGQAVIEFLTPEDATAALSCDGIS
FFGSILKIRRPKDFVEVANGEEKSVAAAAADAISDTVKDSPHKIFIGGISKTFSSKMIME
IASAFGPLKAFHFEVNEDHDEPCAFLEYVDRSVTQKACVGLNGMKLGGQVLTVVQAILDG
SSLENNGSSSFYGIPEHAVPLLEKPTQVLKLKNVFNQEGLSSLSDLEVEEVLEDVRLECA
RFGTVKSVNVVKYGDSNVDNLDMCEVGGYVASAGIEENLRCNERNVKAESLKEAMDNQSE
EIKGLEFPLDAKEVKEVEEGNRVSDNNPVGGVVLDEPCPLDRHDSNMAAEGLMRQSLSKT
LSPEAEQPNTLKDGTCCHEDKVACRIEMDGISLDNKLSAEEELNLDEVNRNLQEASAGFD
GSVETHSDSIENGGKEKQDNNLARIFEQGCVFVEYRRTEASCTAAHCLHGRLFDDRIVTV
EYVPLDLYKKRFTK
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgagcagatctggtcagaaaaaagaaaagtatggaagcagtgacctttccttagataac
tgcaatgatggaactgctgctcgaacaaggcctctcagttttcatgagataataattaga
aggaaaaacaagaaatcacctgaagaaatcaaagaggcagctaggggatctgagaataaa
tcaggggattgcactattgagaatgtttctgatcatcgcgaatctgaaaggcatcacaaa
cacaatatagattcttctgatggtgttgacaaacacttctcagagggagttgtgaagctc
gattcccagggaaaagaagataccattccccctaatggtagcaactcagtgaggagagac
agagaacgccgtgaatcagaaaaaaaaattagggatgacagtttacccaaacataaacat
agagaagttcttcgatccgaaatcagactgaaggatggaagtctagcaaaagaaaacaat
actggagaaagttgtagatcagaaatcaagctgaaggctgaaatgaaagagaaattcacc
aaagataaaggcaaggttgacaaacaaattcttggcctgggaaaaaattatgagtggccg
agtgaaaattccaaagatgtagctgtaaagaagcattcaagagatttaactgggaaagat
agacatgagggcagaagtggagagaagtctgaaagagaaagcaagagaaaacatcggagt
ggaaatgatgagaaaaatggagatggaaatgctgtgaagaaacatgatctaggtaagcgg
cgtgattcagagatttcagagagaagggaaaggaaagaatctcaaaaatctcattatggg
gaatcaaggttgaaaaggatgcgatcaaggagtcgagagcgtgaggaaaggaatagaagg
ttgtccatttctgtctcaccaaaggcacatcgacatacatcatatcatggacgagagcat
gaagaactgtttgcacattcttctaaaggcaggtctggaagacatcattctgatattgac
aggagcagaggaaccagtaatggttcaaataatcactatagtaggtggcatggtggatcc
acaagtggccttggtggttattcgccaaggaagagaagaactgacgctgctgttaagact
ccctcccccgttagtcactccccagaaaagaaaagtgccaagtgggatgttgcaccatca
gattcaaacactgtttctgatccagttccatccactttccaaatgtcaaaccaaaatgca
tcagtgaacgcagatgaattggttagagctacttctctcacttcaagtgaagtgaagcct
cttgatgtggcttcagtttctgcttctttgacaaggcaaaatatctccatttactctcat
cagctgacacaggctacaaagcctttgaggagcctttatgtagataatgtaccagcttca
gtctcggagaaagctgtgatcgaatttcttaataatttcttgctttcatctggtgctgat
cagattcgtggatcccaaccttgtattagctgtgttatacagaaagacaaaggccaagct
gttatagaatttcttacaccagaggatgctactgcagcactttcttgtgatggcatttct
ttctttggctccatactcaaaatcaggcgccccaaagactttgttgaagttgcaaatggt
gaagagaaatcagtggcagcggctgcagctgatgcaataagtgatactgtgaaggattca
cctcacaagatcttcattggtggaatttcaaagactttttcatctaaaatgatcatggag
attgcttctgcttttggacctttaaaagcgtttcactttgaggtcaatgaggatcatgat
gaaccatgtgcttttctagagtatgtggaccgatcagttacccagaaagcttgtgtgggt
cttaatggcatgaaattgggaggtcaagtactaactgttgttcaagctattctagatgga
tcatccttggaaaataatggaagctcatcattctatgggatccctgagcatgcagttcca
cttcttgagaagcccactcaagtcctgaagcttaaaaatgtgttcaatcaagaaggcctt
tcatctttgtctgacttggaagttgaagaagtactggaagatgtgcgattagagtgtgca
aggtttggtactgttaaatctgttaatgttgtcaagtacggagatagtaacgttgacaac
ctagacatgtgtgaagtcggtggctatgtggcatctgcaggaattgaagaaaacttgagg
tgtaatgaaagaaatgtgaaagcagaaagcttaaaagaagctatggacaatcaatcagaa
gaaatcaagggattagagtttccgcttgatgccaaagaagttaaggaagttgaggaaggc
aacagagttagtgataataacccagttggtggcgtggtgctggatgagccatgcccactg
gataggcatgatagtaacatggctgctgaaggcctcatgcggcagagcctatccaaaaca
ctttctccagaagctgagcaaccaaacaccttgaaggatggtacatgctgtcatgaggac
aaagttgcttgtagaattgaaatggacggcatcagtttggataataaattgtcagctgaa
gaagaattgaatcttgatgaagtcaacagaaacttgcaggaagcttctgcaggatttgat
ggaagtgtggaaacacactcagattcaattgagaatggtggcaaagagaaacaggataat
aatcttgcacggatatttgagcaaggctgtgtatttgtggaatatcgaagaacagaagcg
tcatgcacagcggcacattgtttgcatggacgattatttgatgatcggattgtgacagtt
gaatatgtccctttggatctttacaagaagaggtttacaaaatga

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