Mangifera indica (mango): 123221596
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Entry
123221596 CDS
T07684
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123221596
Enzymes [BR:
minc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123221596
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-60S particles
Helicases
123221596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
GDH_HM1
Motif
Other DBs
NCBI-GeneID:
123221596
NCBI-ProteinID:
XP_044500384
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All DBs
Position
7:complement(16670402..16678456)
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AA seq
806 aa
AA seq
DB search
MAANSPPSSSQSAKKKKVNKRERIQHDQELEKFDSLKWNPSLSADDPDPFAHLVGSSELD
GGFLSLEEIDEADYMLQIPKTDKGKPEKKLNLKKQKQGDTEEDLDGVTEDEILDKMEEEK
NEKKKKKKKKKKKKKKAKKAKKNEESMNVSNGQDDVEEELVDEIEVPPEYNAWIELRLHP
LIMKSIYRLGFKEPTPVQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREK
AAKMLEEKGEEAEKYAPKGLLRALIITPTRELALQVTDHLKEIAKGINVRVVPIVGGMST
EKQERLLKARPEVIVGTPGRLWELMSGGEQHLVELHTLSFFVLDEADRMIENGHFRELQS
IIDMLPVTSGSIEGQSQQTQNCMTVSTLQRKKRQTLVFSATIALSADFRKKLKHGSIKSK
QSTIDGLNSIETLSERAGMKPNVAIVDLTNASILANKLEESFIECKEEDKDAYLYYILSV
HGQGRTIVFCTSIAAVRHISSILRILGITVWTLHAQMQQRARLKAIDRFRENEHGILVAT
DVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALISPNDTSKFVSLCK
SFSKESFQRFPLENSYMPEVMKRLSLARQIDKILRKDSQEKANKSWLERNAEAIELVVEN
YDSEEERVKSHKKKKTTSMQLKQLQQELNMMLSRPLQPKTFSRNYLAGAGVSPLLQHQLE
ELSKQKPPDSSTSGENKRRKLVVIGQDCVEPLQALRSAGHEVRMEVKGMAEKRRNLENLR
RKRKEEKKRFRDQRRNQRKRLKGNVE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaattcgccaccatcctcttcccagtctgcgaagaagaagaaagtgaacaag
agagaacgaattcaacacgaccaagaactggagaagttcgattcactcaaatggaatccc
tctctctcagccgacgaccccgaccccttcgctcatctcgtcggctcctctgaactcgat
ggaggttttctttcgcttgaagagattgatgaagctgattatatgttacaaattcccaaa
actgataagggaaagccagagaaaaagttgaatttgaagaaacagaagcaaggagatact
gaggaggacttggatggtgtgactgaagatgaaattctagacaaaatggaggaagagaag
aatgagaagaaaaagaagaagaagaagaagaagaagaagaagaaaaaggcaaagaaagca
aagaaaaatgaggaatctatgaatgtgagcaatggccaggatgatgtagaagaagagtta
gttgatgaaattgaagttcccccagaatataatgcatggattgaattgagactccatcct
ctgattatgaaatcgatatacaggcttggatttaaggagccaacaccagttcagaaagca
tgtattcctgctgcagctcatcaaggcaaggatgtaattggtgctgctgaaactgggtct
gggaaaacacttgcttttggtttacccattatgcagcgcctcttggaagaacgagaaaaa
gctgctaagatgcttgaagagaagggagaggaggcagaaaaatatgctccaaaagggctt
ttaagggctcttatcatcacccctacaagggagcttgcacttcaggtcactgatcatttg
aaggaaatagctaaaggtattaatgttagagtcgttcctattgttggtgggatgtcaact
gaaaagcaagaaagacttctaaaagcaaggcctgaagttattgttggaacaccagggagg
ttatgggaacttatgtctggaggagaacaacatcttgttgagttacatactctgtctttc
tttgtgctggatgaggctgatcgaatgatcgaaaatgggcattttcgagagttgcagtca
ataattgatatgcttcctgtgaccagtggctctattgaagggcaatctcaacaaacacaa
aactgcatgactgtttccaccttgcagagaaagaaaagacaaacacttgttttttctgct
actatagcactatctgctgattttcgtaagaagctaaagcatggttcaataaaatcaaag
caatcaacgattgatgggttaaactctatagaaactctttctgagcgagcgggaatgaaa
cctaatgttgccattgttgatttgacaaacgcatcaatattggcaaataagcttgaggaa
tcatttatagaatgcaaggaagaagataaagatgcctacttgtattatattttgagtgtt
catggacaaggccgcacaattgttttttgtacttcaattgcagctgtgcgacatatttct
tccatcttgcggattcttggcattactgtttggacacttcatgcccagatgcagcagcga
gctcgcctgaaggctattgatcgtttccgtgagaacgagcatggtatacttgttgctact
gatgttgccgctagaggacttgatattcctggtgttcgaactgttgttcactatcagctt
ccacattcagctgaagtttatgttcatagaagtggacgaactgctagagcttctgctgat
gggtgcagtattgctttaatctcaccaaatgacacatcaaaatttgtttctttgtgcaag
tcattctctaaggaaagcttccagcgatttccccttgagaactcatacatgccagaggtc
atgaaaagattgtctcttgcacgtcaaatagataaaatcttgcgaaaggactcccaggaa
aaggcaaataaaagctggcttgaacgaaatgctgaagccatagaattggttgtggagaat
tatgacagtgaggaggaaagagtgaaaagtcataagaagaagaaaacaacatctatgcaa
ttaaaacagttgcagcaggaactcaatatgatgctttcacggccattgcagccaaagaca
ttttcacgtaattatttggcaggggctggcgtttcacctctcctgcaacatcagttggaa
gaattatctaaacagaagccacctgacagcagcacttcaggagaaaacaaaagacggaag
ctggtggttattggtcaagattgtgtggaaccactccaggcactccgaagtgctggtcat
gaggtgcgaatggaggtgaaaggaatggcagaaaagaggagaaatctggagaatttaaga
agaaaaagaaaagaggagaagaaacgttttcgtgatcaacggagaaaccagaggaaacga
ctgaaaggaaacgttgagtaa
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