Mangifera indica (mango): 123222344
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Entry
123222344 CDS
T07684
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123222344
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123222344
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123222344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
zf-RING_10
zf-Nse
Prok-RING_4
Zn_ribbon_6
zf-RING_4
TRAF3_RING
CR_prot_dom_plant
Rtf2
zf-ANAPC11
RING_XB3-XBAT31
Sina_RING
TerY_C
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
123222344
NCBI-ProteinID:
XP_044500979
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All DBs
Position
8:complement(5217231..5220130)
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AA seq
218 aa
AA seq
DB search
MSAQAVRGPPIRYRRRKGLPDLNAPPCESRDREGTSNDISLQEVQASQQGLSIPPAPIDV
EAIDDDVIESSPRAFAEAKNNSRRNRGRNIVVDVDSGNIGRTTRLTNNNRSKRRRVSPNS
TIVNCGFYINLEGTSNSMRERVSMPPPPPPPPPKEPVFTCPICMGPLVEEMSTKCGHIFC
KACIRAAISAQAKCPTCRKKVTAKELIRVFLPATTCTQ
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccaggcagtgagggggcctcctataaggtatcgtcggaggaagggactgcca
gatcttaatgcaccaccttgtgaaagtagggatcgagagggaacctcaaatgatatcagt
ttacaggaagtgcaagctagccaacaagggctgtcgataccacctgctccaattgatgtt
gaggctattgatgacgacgttatcgagtcttctcccagggcttttgccgaagctaaaaac
aattccagaaggaaccgtggaaggaatattgtggttgatgtagattcaggtaacattgga
agaacaacaaggttgactaataataaccgtagtaagcgcagaagggtatcacctaactca
actattgtcaattgtggtttttacataaatttggaaggcactagcaactctatgagagag
agagttagcatgcctccaccaccaccaccaccaccaccgaaggagcctgtattcacttgc
ccaatatgcatgggcccattggttgaggagatgtcaacgaagtgtggtcacatattctgt
aaggcatgcattcgggctgcaatatcagcacaggctaaatgccccacatgtaggaaaaag
gtcacagcaaaagaactcattagagtcttccttccagcaaccacttgtacccaataa
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