Mangifera indica (mango): 123222423
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Entry
123222423 CDS
T07684
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
minc
Mangifera indica (mango)
Pathway
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123222423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123222423
03009 Ribosome biogenesis [BR:
minc03009
]
123222423
04131 Membrane trafficking [BR:
minc04131
]
123222423
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
minc04147
]
123222423
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123222423
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123222423
Membrane trafficking [BR:
minc04131
]
SNARE
SNARE associated proteins
Others
123222423
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123222423
Exosome [BR:
minc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123222423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_17
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
NACHT
Vps4_C
AAA_7
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Sigma54_activat
AAA_lid_PRS2_C
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
123222423
NCBI-ProteinID:
XP_044501123
LinkDB
All DBs
Position
1:complement(3153142..3158526)
Genome browser
AA seq
805 aa
AA seq
DB search
MSNQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSVDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRREN
PEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPE
AGTGAAASDPFAATAGGADDDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcaagctgaatcctccgattctaaggggacgaagagggattttagcacggca
attttggagcggaagaaggcgccgaatcgtctcgttgtagatgaagctgtaaacgacgat
aactctgtggttgcgcttcacccggataccatggagaagctccagctctttcgcggtgac
acgatcttgatcaagggaaagaaaaggaaagacactatctgtattgctcttgctgatgat
acgtgtgatgaaccaaagataaggatgaacaaggtggtgaggtcaaacttgagggttagg
cttggagatgttgtttctgttcaccagtgtcctgatgttaaatacggaaagcgtgtgcac
atattacctgtcgatgacacaattgaaggggttactggaaatctctttgatgcatatttg
aaaccttattttctggaggcatatcgtccggtgaggaaaggtgatctattccttgtgaga
ggaggaatgagaagtgtggagttcaaggttattgagactgaccctgctgagtactgtgtg
gttgcccctgatactgagatcttctgtgaaggagagccagttagaagggaggatgaggat
agattagatgaagttggttatgatgatgttggtggtgtcagaaagcagatggctcagatt
cgagaattagtggagcttccattgaggcatccacagctcttcaagtcaattggtgtgaag
ccaccaaaaggaattttgctttatggacctcctggatctgggaaaacactgattgcccgt
gccgttgctaatgaaactggtgctttcttcttctgtatcaatggaccagagattatgtca
aaattggctggagagagtgaaagtaatcttaggaaagcgtttgaggaggcagaaaaaaat
gctccttcaattatttttattgatgagatagattcaattgctcccaaacgagagaaaact
catggggaagttgaaaggaggattgtctcccagctcttgacactcatggatggactgaaa
tcccgtgcacatgtgatcgttattggagctacaaatcgtcccaacagcgttgacccagct
ctgagaaggtttggtagattcgatagagaaatagacattggagtgccggatgaagttggg
cgtcttgaagttctccgtatccacacaaagaacatgaagctttctgatgatgtagatttg
gaaagaattgcaaaggacacacatggttatgttggtgctgatctagcagcgctttgtact
gaggctgctcttcagtgcatcagggagaagatggatgtgattgacctagaagatgagaca
atagatgctgagatactcaattctatggcagttacagatgaacacttcaagactgccctt
ggaactagcaacccatctgctctacgagaaactgtggttgaagtgcccaatgtcagttgg
gaggatattggaggacttgagaatgttaagagggagctccaagagactgttcaatatcca
gtggagcatcctgagaaatttgagaaatttggaatgtcaccctcaaagggagtccttttt
tatggtcctcctggatgtgggaaaacccttctggccaaagctattgccaatgaatgtcaa
gctaatttcatcagtgtcaagggtcctgaactgcttacaatgtggtttggagagagtgag
gccaatgtaagggaaatctttgacaaggctcgacagtcagctccttgtgtcctgttcttt
gatgaactcgactcaattgctacccagagaggaagcagtgtaggagatgctggtggtgca
gctgatagggttttaaaccagctcctgactgagatggatggtatgtctgcaaagaaaact
gtcttcattatcggggccacaaacagaccagacatcattgatcctgcacttctgcgtcct
ggtcgtcttgaccagttgatttatattcctctccctgacgaggattctcgtcatcaaatt
tttaaggcttgcttgaggaaatcaccagtttccaaagatgttgacctcagagcacttgct
aagtatactcaaggcttcagcggtgcagatattacagaaatatgccaacgggcatgcaaa
tatgccattagagagaatattgagaaagatattgagagggagaggaggagaagggagaac
ccggaggcaatggaagaggatgtggaagatgaagtggcagagatcaaagcagcccatttt
gaagaatcaatgaaatatgctcgaaggagtgtcagtgatgctgacatacggaaataccag
gcatttgcacaaactttgcagcagtcgagagggttcggatctgaatttaggtttccagaa
gctggaacaggtgctgctgcatcagatccttttgctgcaactgctggtggtgcggatgat
gatgacctttacagttaa
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