Mangifera indica (mango): 123222496
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Entry
123222496 CDS
T07684
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
minc03015
mRNA surveillance pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123222496
09122 Translation
03013 Nucleocytoplasmic transport
123222496
03015 mRNA surveillance pathway
123222496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123222496
03041 Spliceosome [BR:
minc03041
]
123222496
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123222496
Spliceosome [BR:
minc03041
]
Complex C
Other components
EJC/TREX
123222496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
123222496
NCBI-ProteinID:
XP_044501244
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Position
1:9504188..9508986
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AA seq
813 aa
AA seq
DB search
MCCFDLCFLMLGKMSSSSYPVLDNKPIDQWKVTELKEELKRRKLKSSGKKEELIRMLGNA
IRIEREQAAKEEEVEANNDADSVSEPVVGVKDAKKLPNDTGIAKDVVIVGSQEKEKVDNV
AVHLDMNTSAAALDQGEIESIEIAGNINENDAALEQEKILERDITGDTNPARVEEELVIH
KTIVETSKTVTENVVTELALSGQELHNSGALKENLYSSVRLEISKPQLEDESVKPLRKDD
MLDTSAPVNQVSEVSANLGSQIKSDSISTDSVSINEKIELKDNIIADNVKLEQDVIRPEM
VEPSSTNIVPVGGESHPMDVEEPLERKTSIEETDYKNATIADMGKKNDSANVGYSEKLNL
DRSSGEDSIEEDVLESNKQIDSKDSSDELRDRSEKDEVPAVKVDSPVDVIGDGLSDGKKV
VQVEGKSCPAVVAEKRKINDQEAVGSNEPLKRQRKWNSESLKLTDQSSNLIPTTTPRDTF
QSSASKRNLSRSDSVVSDDTAKERVVPPSPKSPTNSLRVDHFVRPFTLKAVHELLGKTGS
FTCFWMDHIKTHCYVTYSSVDEAMETRKALYNIQWPPNNGGRPLVAEFVDPQEVKMRAEA
PPQLSATPVSVPPPAPPALQPQPSTHQPAPRQQLAPPPPVSNSAPARERFTLPLPPPTPE
KVDPPIMTLDDLFRKTKATPCIYYLPLSEGQVVGKLQSRRNNTKQSAGVNYRKELFQPSL
GIWFVNGFRFGFSKDSACLRHMLLLVLEPSSSPNKTESLTGVLCLVFLLNWNSNFYRLVI
ILLDYFSFYYWMRSSISDRVWSSLYILLQLVFS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgttttgatttgtgttttctaatgttgggaaagatgtcttcgtcgtcatatcca
gttcttgacaacaaaccaattgaccagtggaaggttacagaacttaaagaagagctaaag
aggcggaagttgaaatcaagtggtaagaaggaggagttgatacgaatgctgggtaatgcc
attcgtattgaacgggaacaggctgcaaaggaagaagaagtggaagcgaataatgatgct
gatagtgttagcgaacctgtagttggggtaaaagatgcaaaaaaattgccaaatgatact
ggaattgccaaagatgttgtgattgttggtagtcaagagaaggaaaaggtggataatgtt
gcggttcatcttgacatgaacactagtgctgctgccttggatcaaggagagattgaaagc
atagaaattgctggtaatattaacgaaaatgatgctgccttagagcaagagaaaatccta
gaaagggacattacaggtgataccaaccctgctagagtggaggaggagctggttatccat
aaaactattgtggaaactagcaaaacagttactgagaatgtggttactgaattagctttg
agtgggcaagagttgcataactctggagcactgaaggagaatttgtattcaagtgttcgg
ctggagatttcaaagccccagctggaggatgagagtgtaaagcctctgcgcaaggatgac
atgcttgacacctctgctccggttaatcaggtatctgaggtcagcgctaatttagggtct
caaataaaatctgattctatttctactgattctgtgtcaattaatgaaaagattgaacta
aaggataatataattgctgataatgtcaaattagaacaagatgttattaggccggagatg
gtggaaccatcatctaccaatattgtcccagttggtggtgaatcacatccaatggatgtt
gaagagccacttgagaggaagacatctattgaggagacggattacaagaatgctacaatt
gcagatatgggcaagaaaaatgacagtgcaaatgtgggttattcagaaaagttaaatttg
gaccgaagctctggtgaggactctatagaggaggatgtcctggagagtaataaacaaata
gattcaaaggatagttctgatgaactgagggacagaagtgagaaagatgaagtgcctgct
gtgaaagtggatagtcctgtagatgttattggagatggtttatctgatggcaaaaaggtt
gttcaagttgagggtaagagttgtccagctgtggttgctgagaaaagaaaaattaatgat
caagaagcagtgggaagcaatgagcctttgaagaggcaacgtaagtggaactctgaaagc
ctgaagcttacagaccagagttctaatcttatacctaccaccacaccaagggacacattt
caatctagtgcttcaaaacggaacctctctagatctgattcggttgtcagtgatgacaca
gccaaggaacgtgttgttccaccatctccaaaatctccaactaattccctcagggttgat
cattttgtgcgtccttttaccctaaaagctgtgcatgagcttctaggcaagactggatct
ttcacctgtttctggatggaccatattaagactcattgctacgtcacttattcgtcagtt
gatgaagccatggagacacgtaaagctttgtataacatacaatggcctccaaataatggt
ggacgcccattggtggctgagtttgtggatccccaggaagtgaaaatgcgagcagaggct
cctcctcagttgtcagctacacctgtcagtgtgcctcctccagctccacctgccttacag
ccccagccttcaacccatcaacctgctcccagacagcagcttgcaccaccaccaccggta
tctaactcagccccagcaagagagcggttcactcttccactccctcccccaaccccagaa
aaagttgacccaccaatcatgactctggatgacctatttcggaaaaccaaagcaactcct
tgcatctactacctgcctttatcagagggacaggttgtggggaaacttcaatcacggaga
aataacaccaagcagtctgcaggtgttaactataggaaggaactgttccagccaagctta
gggatctggttcgtcaatggatttcggtttggtttttccaaagactctgcctgcttgagg
catatgcttcttttagtgttagaaccctcttcctcccccaacaaaactgagagcttgaca
ggtgtcttgtgtcttgtttttctgttgaactggaattccaacttttatagactggttatt
atattgttagactatttttctttttactattggatgagatcttctatttcagatcgagtt
tggtcttcattgtatattctactacaactagttttttcttga
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