Mangifera indica (mango): 123222626
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Entry
123222626 CDS
T07684
Name
(RefSeq) terminal nucleotidyltransferase 4B-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123222626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123222626
03016 Transfer RNA biogenesis [BR:
minc03016
]
123222626
Enzymes [BR:
minc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
123222626
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
123222626
Transfer RNA biogenesis [BR:
minc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
123222626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
PAP_NTPase
Polbeta
TUTase
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
123222626
NCBI-ProteinID:
XP_044501424
LinkDB
All DBs
Position
1:26260073..26265396
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AA seq
519 aa
AA seq
DB search
MEQQPDNILYETLSPLRLSTPSDVPSRHQSPPLDQLEPYTVFRNEISLSDLGGAYVESPA
ADFFSLDVNSSVDDELVEVEPMRQLEPETPATEVEPRLESGWFRGNSRFKSPMLQLHKEI
VDFCEFLSPTPEEKALRNSAVESVFDVIKYIWPQSKPEVFGSFRTGLYLPTSDIDVVILG
SGIINPPIGLQALSRALSQRGIAKKIQVIAKARVPIIKFVEKKSGVSFDISFDAENGPKA
AEFIKDALYKWPQLRPLGLILKVFLQQRELNEVYSGGIGSYALLTMLMAVLKSFYECQTS
PEHNLGVLLVHFFDIYGRQLNTTNVGVSCKGTHTFFKKSSKGFTTKGRPFLISIEDPQAP
DNDIGKNSFNYFQIKSAFITAFATLTNPKTISSLGPNRSILGTIIRPDPILLDRKGGSNG
EMTFNNLLPGAGKPLHTQYVDQQQEILCNWQSDYEEESFPRGDDQSSRKKLKTSFKEKSR
KKKVKESGKMERHEESGSRKEKTKKRRRRHNCDYVNGFS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaacccgacaacatcctctacgaaaccctaagccctctccgtctatctact
ccctccgatgtcccctcacgccatcaatctccgccgttggatcaattggaaccctacact
gtgtttcgcaacgagatttccttatctgatcttggcggcgcttacgtggagtctcccgca
gccgattttttctctctggatgtgaatagcagtgtagatgatgaattggtggaagtcgag
ccgatgaggcaactggagccggagactccagctacggaagtggagccgaggttggagagc
ggctggttcagaggcaatagtaggtttaagagtccgatgcttcagttacataaagagatt
gtggatttctgtgaatttctttctccaaccccggaagaaaaagctcttcgcaactctgca
gtagaatctgtttttgacgttatcaaatacatatggccccagagcaagcctgaggttttt
ggctcattcaggacaggcctttatcttccaacgagtgatatcgatgttgtgattctggga
tccggtatcataaacccaccaatcggtttgcaggctctttctagggcattatctcaacgg
ggtattgccaaaaagatacaggtgattgcaaaggctcgtgtgcccatcataaaatttgta
gagaaaaagagtggtgtttcgtttgatataagttttgatgcagaaaatggaccaaaagct
gctgagttcattaaggatgcattatataagtggcctcaattgcgcccattaggtttgatc
ttgaaagtttttttacagcagagggagttgaatgaggtatattctggtgggattggctca
tatgctctccttaccatgttaatggctgtattaaagagtttttatgagtgtcaaacttct
ccagaacataatttgggagtccttctggtacacttctttgatatctatggacgccaattg
aacaccacaaatgttggtgtatcttgtaaagggacccacaccttctttaaaaagagtagc
aaagggtttacaactaaggggcgaccgtttctcatctccattgaggacccacaggcacca
gataatgacattgggaagaactctttcaattacttccagattaaatcagcttttataacg
gcatttgcaaccttgacaaatccgaagaccatctctagcttagggccgaacagaagcatt
cttggtaccataattagacctgatccaatcttgctggaccgtaagggaggatctaatggt
gagatgacttttaacaacttgcttcctggagctgggaagccattacatacacaatatgtg
gaccagcaacaagagattttgtgcaattggcagtcagactatgaagaagaatccttcccc
cgcggagatgatcagtcttccaggaagaagctgaaaacttctttcaaagagaaatctaga
aagaagaaggttaaagaatcagggaagatggagaggcacgaagaaagtggctcaaggaaa
gagaagacaaagaagagacggcggagacataactgcgattatgtcaacggttttagttga
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