Mangifera indica (mango): 123222737
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Entry
123222737 CDS
T07684
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123222737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123222737
Spliceosome [BR:
minc03041
]
Complex C
Other components
Step II factors
123222737
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Tudor_3
Motif
Other DBs
NCBI-GeneID:
123222737
NCBI-ProteinID:
XP_044501603
LinkDB
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Position
8:complement(5912010..5916179)
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AA seq
535 aa
AA seq
DB search
MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKP
SLKHQRKWKSDPNYTKSWYDRGAKIFHADKYRKGACTNCGAMTHDAKSCMERPRKMGAKW
TNKNIAPDEKVETFELDYDGKRDRWNGYDTSTYARIVERYEARDEARRKFLKEQQLKKLE
EKNNNQSGEDGVSDGDDDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYGGDNQYRSSGQALEFKELNI
HSWEAFEKGQDIHMQAAPSQAELLYKNYKVIKEKLKSRTKDTIMEKYGNAAAEEELPREL
LLGQSEREVEYDRTGRIIKGQETALPKSKYEEDVYINNHTTVWGSWWKDHQWAYKCCRQV
IQNSYCTGAAGIEAAEAATDLMKANIARKEASEEHAPVAEKRHITWGTDVPEDLVLDEKL
LVDALKKEDERRREEKDERKRKYNVKWNDEVTPEDMEAYRMKRVHHDDPMRDFLH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcatcggtggcgtttaagtctagggaggatcaccggaagcaaattgaatta
gaagaagcgcgtaaagctgggcttgctccagctgaggttgatgaggatggaaaagaaatc
aatcctcatattcctcagtatatgtcctcggcaccatggtatctcaattctgaaaagccg
agtttaaaacatcaaagaaagtggaagtccgaccccaattacacaaagtcatggtacgac
cggggcgcgaaaattttccatgctgataaataccgcaaaggtgcatgtacaaactgtggc
gcaatgacacatgatgcaaagtcatgcatggaacgtcctcgaaaaatgggagcgaagtgg
actaacaaaaacattgcacctgatgaaaaggtcgagacctttgagcttgattatgatggg
aagagagaccgttggaacggctatgatacatcgacctatgcccgaattgttgaaagatat
gaagccagggatgaagcacggaggaaattcttgaaggagcagcaattgaagaagttggag
gaaaaaaataataaccagagtggtgaggatggggtaagtgacggggatgatgatgaagat
gatctaagggttgatgaagccaaagttgatgagagcaagcaaatggattttgcaaaggtt
gaaaaacgtgtgcgcacaacaggtggtggaagcacaggaactgtaaggaatttgcgaatt
cgggaggatacagcaaagtacctcttaaatcttgacgttaattcagcacactatgatcca
aaaacccgatccatgcgtgaagatccacttcctgatgcagatccaaatgagaagttttat
ggaggggataaccaatacagaagtagtggtcaagctttggagtttaaggagctcaacatc
cattcttgggaagcatttgagaaaggacaagacattcacatgcaagctgctccttcccaa
gctgagttgctgtataagaattataaggtcataaaggagaagctgaagtccagaacaaag
gacacaattatggaaaaatatggcaatgcagctgcggaggaagaacttccaagagaactt
cttttgggacaaagtgaaagagaagttgaatatgatcggactggtcggataattaaggga
caggagacagcacttcctaagagcaaatacgaggaggatgtttatattaataatcacact
actgtttggggttcatggtggaaggatcatcagtgggcgtacaagtgctgcaggcaagtg
atacagaacagctattgcacaggtgcagctggaattgaggctgcagaggctgcaacagac
ctcatgaaggccaatattgctcgtaaagaggcctctgaagagcatgcaccggtggcggag
aagaggcatataacttggggaaccgatgttccagaggatttggttttggacgagaaatta
ctcgttgatgcactcaagaaggaggacgaaaggaggagagaggagaaagatgagagaaag
aggaaatacaatgtcaaatggaatgatgaggttactcctgaggacatggaggcatatagg
atgaagagagtgcatcatgatgatcccatgagggatttcctgcattaa
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