Mangifera indica (mango): 123222858
Help
Entry
123222858 CDS
T07684
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
minc
Mangifera indica (mango)
Pathway
minc00040
Pentose and glucuronate interconversions
minc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123222858
Enzymes [BR:
minc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123222858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123222858
NCBI-ProteinID:
XP_044501779
LinkDB
All DBs
Position
8:5424678..5428781
Genome browser
AA seq
425 aa
AA seq
DB search
MGVSHRWISSVYALLILCLFLGVKASTEKHKLNSSSDDSRAEHAVENPEEVAAMVDMLIR
NNTERRKLGYFSCGTGNPIDDCWRCDPKWHLHRKHLANCAIGFGRNAIGGRDGKYYVVSD
PSDDNPVNPKPGTLRHAVIQDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANG
ACITIQYITNVIIHGIHIHDCKPTGNAMVRSSPSHYGWRTMADGDGISIFGASHIWIDHN
SLSNCADGLIDAIMASTAITISNNYFTHHNEVMLLGHSDSYTRDKQMQVTIAYNHFGEGL
IQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPSNPFAKEVTKRVDTS
DGVWKSWNWRSEGDLLLNGAYFISSGTGSAASYARASSLGAKSSSLVGILTSSAGAMSCR
VGRQC
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggggtttctcatagatggatcagctctgtgtatgcattactgatattatgcttgttt
cttggcgttaaagcctccacagagaagcacaagctaaactctagctcggatgattcaagg
gctgagcacgctgttgaaaatccagaggaggtggctgctatggttgacatgttaattcgc
aataacactgaaagaagaaagttgggatatttttcatgtggaactggcaacccaattgat
gattgttggcgttgtgaccctaaatggcacttacaccgaaagcatcttgctaactgcgcc
attggttttggacgcaatgctattggtggccgagatggtaagtactatgtggtaagtgac
ccaagtgatgacaacccagtcaatcccaaaccaggcacactccgtcatgccgtcatccag
gatgagcctttgtggattgtgttcaagcgagacatggtgatcacactgaagcaagagctt
ataatgaatagctttaagacaattgatggtcgtggtgtcaatgtccatatagctaacggg
gcttgcatcacaattcaatacattaccaatgtcattattcatggtatacatatacatgat
tgtaaaccaactggcaatgccatggttcgaagctccccaagtcattatgggtggaggaca
atggctgatggagatggcatctcaatttttggagcaagccatatttggattgaccacaat
tctctatctaattgtgccgatggtcttattgatgctataatggcctcaacagcaattact
atttccaacaactacttcacccaccataatgaggttatgctattaggacacagtgactcc
tatacgagagacaagcagatgcaagtgactattgcctacaaccatttcggtgaaggtctt
atccagagaatgccaaggtgcagacatgggtatttccacgtggtgaacaatgactacaca
cactgggaaatgtatgccatcggtggaagtgctaatccgaccattaacagccagggaaac
agataccttgccccatcaaatccctttgctaaggaggtaacaaagagggtagatacatca
gacggtgtatggaagagttggaattggcgatcagagggagatctgttgctgaatggagcc
tacttcatttcatcaggaactggatcagcagccagctatgcaagagcctcaagcttaggg
gcaaaatcctcttccttggttggcatccttacctctagtgccggtgccatgtcctgccgt
gttggtaggcaatgttaa
DBGET
integrated database retrieval system
