Mangifera indica (mango): 123222868
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Entry
123222868 CDS
T07684
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL-like
KO
K12133
MYB-related transcription factor LHY
Organism
minc
Mangifera indica (mango)
Pathway
minc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123222868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123222868
Transcription factors [BR:
minc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
123222868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
123222868
NCBI-ProteinID:
XP_044501795
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All DBs
Position
8:2354205..2366658
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AA seq
765 aa
AA seq
DB search
MDTYSSGEDLIIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAHSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTYSAAHTLQVGTR
DIKIQTPVSALNCKQLSDLEKEPFSEKIEGDEKPTNTKDNQDENCSEVFTLQCEAHCSSA
SVNKNSIPTPLGLRNSCTLKEFVPVLKDTANQDETYESYVTVELEGNEKIDKPDAKQAFQ
ENGTSKALTLESSSRADKILVQGEKTDNFKDASQTDEMQAAHNYPRHVSVHILDGSLGTG
TQSPSDMPMQESIFHPAREVHGNSNLFTNSAASATTEHQSNVPSSTHPSFPTFHPPFTPV
RQNQDDYRSFLHISSTFSSLIVSTLLQNPAAHAAASFSATFWPYASLGNSADPPACPQGG
FPSRQVNSAPSMAATAASTVAAATAWWAAHGLLPLCAPLHAAFTCLPSTTAVPSMDPGQV
PAAKTESKENTTPNPLLDDQQQEPEYSEALQAQHSASKSPGLSTSDSEESASAKLNAGSK
AARHEKALEENVLNDSDKTKNRKQVDRSSCGSNAPSSSEVETDALEKHEKGEKESKEADP
NHLAADCSTRRTRSSSNVSDSWKEVSEEGRLAFQALFFREVLPQSFSPLHDVKDMPMKDN
TQVDKQNGKDKDGDTSTLDLNTKTRGSCCGEQELENITMFRGEKNWEEGPLTIGIGHGKL
KTRRTGFKPYKRCSVETRENRIVNSSNQADEKGPKRIRLEGEAST
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggacacctattcctctggagaagatttgattattaagacgaggaagccttatacaatt
actaagcaacgagagcggtggacggaagaggagcataataggtttctcgaagccctgaag
ctctatggacgagcttggcaacgcattgaagaacacataggaacaaagactgctgtgcag
atcagaagccatgcccaaaagtttttttctaagctggagaaggaagctcattctaaagga
gttccaataggacaagctattgatattgacatacctcctccacgccccaaaagaaaacca
cgtaatccttatccccggaagacctactcagctgctcacacattgcaagttgggacaaga
gatataaaaattcaaactccagtttctgcattgaattgtaaacaactatcagatttagag
aaagaaccattttctgagaaaattgaaggagatgagaagccaacaaatacgaaagataat
caagatgaaaattgctcagaagtgtttaccctacaatgtgaggctcactgttcctctgct
tcagtaaacaaaaactctataccaacgccattgggactcagaaactcgtgcactcttaag
gaatttgttcctgtgctgaaagacacagccaaccaggatgaaacatatgaatcttatgtc
acggttgaacttgagggaaatgaaaagattgataaacctgatgccaagcaggcatttcag
gaaaatggcacaagtaaagcattgaccttggaaagctctagccgagcagataagatatta
gtccagggcgagaaaacagataattttaaagatgcatcacagacagatgaaatgcaagct
gcgcataactatcctaggcatgtttctgtgcacattcttgatgggagccttggaactggt
actcaatctccttcagatatgccaatgcaagagtccatatttcaccctgcaagagaagtt
catggaaactctaatttatttacaaattcagctgcatctgccactactgaacatcagagt
aatgtgccatcatctactcatccatcatttccaacttttcatcctccctttaccccagtt
cgccaaaatcaagatgactatagatcatttctccacatctcctccaccttttcaagtctt
attgtgtctactctgttacaaaaccctgcagcgcatgctgcagcaagcttttcagcaaca
ttttggccttatgcaagtttgggaaattctgcagatcctcctgcatgtccacagggaggc
tttccatctagacaagtgaattctgctccaagtatggcagctactgctgcttccactgta
gcagctgccactgcatggtgggcggcccatggactgcttcccttgtgtgctcctctccat
gctgcatttacctgccttccatctacaacagcagttccgtcaatggatcctggtcaagtt
ccagcagccaaaacagagagcaaagagaataccactccaaatcctctcttggatgatcag
caacaggagccagaatattctgaggctttgcaagctcaacattcagcctctaaatcacct
ggtttatccacatcggactctgaagagagtgcaagtgcaaagcttaatgctggatcaaaa
gctgctagacatgagaaggctctggaagaaaatgtgcttaacgattcagacaaaacaaag
aacagaaaacaggtggaccgctcctcgtgtggttcaaacgcaccttctagcagcgaagtt
gagacagatgcacttgaaaagcatgagaaaggcgaaaaggaatcaaaagaagctgatcca
aatcatctggccgctgattgtagtactcgtcgcactagaagcagcagcaacgttagtgat
tcttggaaggaagtctctgaagaggggcggctggcatttcaagcactcttcttcagggag
gtattgccacaaagcttttcacctctacatgatgtgaaggacatgccaatgaaggataac
acccaagtagataagcaaaatggcaaagacaaagatggagatacatcaactttagatctg
aacaccaagactaggggttcatgttgtggcgaacaagagttggagaatattacaatgttc
agaggggaaaaaaactgggaggaggggccgctgacaattgggattggacacggaaagctg
aagactcgtcgaacaggttttaaaccatacaaaagatgttcagtggagaccagggaaaac
agaatagttaattcgagcaaccaagcagacgagaaaggcccgaagaggatacgcttggaa
ggagaggcctcaacttag
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