KEGG   Mangifera indica (mango): 123223018
Entry
123223018         CDS       T07684                                 
Name
(RefSeq) U6 snRNA phosphodiesterase-like isoform X1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
minc  Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:minc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:minc03041]
    123223018
Spliceosome [BR:minc03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    123223018
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2
Other DBs
NCBI-GeneID: 123223018
NCBI-ProteinID: XP_044502005
LinkDB
Position
8:4573931..4576120
AA seq 294 aa
MEALIASYGDTSSDSDSELSSSTTITSTGATNSNVQPETTSLPLPPPPLSLLTPPNSLGT
VDYLTSSQPQPSRLRSFPHVEGNYALHVYIPVTVPSASKKELAQLLKKVSSIVPGLHAVD
IDIPLSSLCEDDSKFQLVTLGRQFHISLGRTVPIRVHQIDSIVAMLRQKLQCQRRFWIDF
SQWEVFINDDCTRSFLSIEVLTGGLLEITKQIQVVNEVYRLHNLPEFYKSPRPHISLAWA
LGDISNSLKRVIEEETKKLRVEGSLQKRIFSSKFSGTECKIGSKIYKICKFSDN
NT seq 885 nt   +upstreamnt  +downstreamnt
atggaagctctgatagcctcgtacggtgacacatcgtccgattctgattcagaactcagt
agctcaacgacaattacaagcaccggtgccacaaattcaaatgttcagccggagacgact
agtttgcctttgccgcctccgcctctctctctcctcactcctcccaattcattgggtacg
gtcgattatctcactagtagtcagcctcagccgagcagactccggagctttccccatgtt
gaaggcaactatgccttacacgtctatatcccagttactgtaccatctgcatcaaagaag
gagctggcccagcttttgaagaaggtttcatctattgtaccaggtcttcatgctgttgac
attgacattccattaagtagcctgtgtgaagatgattctaagtttcagctagttacattg
ggaaggcaatttcacataagtttaggaagaactgtcccaatacgtgttcaccaaattgac
tccattgtagcaatgcttcgccagaagcttcagtgtcagcggcggttttggattgatttt
agtcagtgggaggttttcataaatgatgattgcacacgatcatttctctcaatagaagtt
cttacaggaggattacttgagatcactaagcagattcaagtggttaacgaggtttacagg
cttcataatcttcccgagttttacaagagcccacgccctcatatatccttagcttgggca
ttgggagatattagcaattctttaaagagagtgatcgaagaagagacaaagaaattaagg
gtcgagggttcattacagaaacgtatcttttcaagtaaattcagtggtactgagtgtaag
attggtagtaaaatatataaaatatgtaaattttcagataattaa

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