Mangifera indica (mango): 123223434
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Entry
123223434 CDS
T07684
Name
(RefSeq) RING-H2 finger protein ATL16-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123223434
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123223434
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123223434
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
Prok-RING_1
zf-RING_16
Baculo_IE-1
Prok-RING_4
zf-RING-like
VPS18_RING_C
SLX1_C
zf-RING_4
zf-RING_Vps41
zf_RING_Vps8
PHD_NSD
RINGv
zf-C3HC4_4
zf-RING_10
Rtf2
Motif
Other DBs
NCBI-GeneID:
123223434
NCBI-ProteinID:
XP_044502531
LinkDB
All DBs
Position
8:5953852..5956038
Genome browser
AA seq
328 aa
AA seq
DB search
MSSGFCTHQMPAMQTSNSTFPILAIAVLSSMAIVFVLISYYIFVSKCCNIWQRLNLPRRF
SIFGARQNEEPSIIYSPTMWNCGLDDSVIRDIPTCQFRREDGDEEKNIYGCVVCLNEFQE
QEFLRVLPNCGHAFHLDCIGKWLQSNGNCPLCRTIISGSTRYFFDHIIAPRSSPQDSQQY
TDSLVGADEDFVVIEFGGDEDALFPHRQQERENSNEVFVQPTSQSPKRSEQKLKNLKQKN
GHHKGDECIDIIRKKDDQFPIKPIRRSFSLDFAADRQLYLSVQAIFQQNGHHREVNSNEE
SSNRSQRTFLPFRHGRGSRSDALHVESN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaggcttttgcacccatcaaatgcctgcaatgcaaacttccaattctactttt
cctattctagccattgctgttctaagcagcatggccatagttttcgtgctaattagctat
tacattttcgttagtaaatgctgcaatatctggcaaagacttaatctaccaaggcgattt
tctatctttggagctagacagaatgaagaaccctctataatctactctccaacaatgtgg
aactgtggactcgatgattcagtgattcgcgatatcccgacttgtcaattcagaagagaa
gacggtgatgaggagaaaaatatctatggatgtgtggtttgtttaaacgagtttcaagaa
caagaatttctaagagttcttccaaattgtgggcatgctttccatttggattgtattggt
aaatggcttcaaagcaatggcaattgccctctttgccggacaatcatttcgggctcaact
cgatatttcttcgatcatataattgcaccaagatcttcacctcaagactcacagcaatac
actgatagccttgtcggcgctgatgaggattttgtggttattgaatttggaggagatgaa
gatgctttgttccctcataggcaacaagaaagagagaattcaaatgaggtgttcgttcag
cctacaagtcagtcaccaaagaggtcagagcagaagctcaagaacttaaaacaaaaaaat
ggccaccataaaggggatgagtgcattgatataataagaaagaaagatgatcagttcccc
attaagcctattaggagatccttctcactggattttgctgcggatcgacagctttattta
tctgttcaagcaatttttcaacaaaatgggcatcatagagaggttaatagtaatgaagaa
tctagcaacagatcccagagaacctttctaccattcagacatggaaggggatcaagaagt
gatgctctacatgttgaatccaattga
DBGET
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