Mangifera indica (mango): 123223438
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Entry
123223438 CDS
T07684
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 13 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
minc
Mangifera indica (mango)
Pathway
minc04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123223438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
minc04040
]
123223438
Ion channels [BR:
minc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123223438
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
123223438
NCBI-ProteinID:
XP_044502535
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Position
8:1942929..1947032
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AA seq
716 aa
AA seq
DB search
MNMGRVKFVRFEDWSSEKSDSERRLPLENGFYSRRIRPTISAVIESFQRCFEMGSEKIKS
IKKPLRIPSHVNQSALEPESGKKILNPQSQFLQRWNKIFMISCVIALAIDPLFFYIPVID
GKKKCLNVDFNLEISVCLFRTAVDLFYILHIIFQFRTGFISPSSRVFGRGELIDDPKAIA
KRYLTSYFVFDVLAILPLPQVVLLIIASRKGPIALITKETLKAVIICQYVPRVARLYPLY
HDVNRTSGNFTETAELGAALNLFLYMLASHMIGAIWYLYSIERQDSCWRQVCEKDPTNCK
HHSLYCEHGKSNAGFLNNSCPFIDPDDISVPNGFNFGIAIDALRSRVVEEKHFSKKFFYC
FWWGLRNLSSLGQNLRTSTYVGEIFFAFFISISGLVLFALLIGNMQKYLQSKTVRVEEMR
IRRRDTEQWMSHRLLPENLKDRIRKYEQYKWQETRGVEEDALIRNLPKDLRRDIKHHLCW
DLLKKVPMFEKMDEQLLDAMCDRLKPVLCTEKSFILREGDPIEEMLFIMRGKLVSMTTNG
GRTGFFNAVYLKATDFCGEALLTWALDPQSSTYLPISTRTVQALSEVEAFALMAEDLKFF
ASQYRRLHSKQLQHSFRFHSVQWRTWAACFIQAAWRRYCRKKLTKSLREAEDRLQDALAT
ETGPTSLAATIYASKFAANLLRPLRQNGGRSTRLAQRLPPLIPQKPTEPDFTAKDF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggggcgtgtgaaatttgtaagatttgaagattggagttcagaaaaatctgat
tcagagaggcgattacccttggaaaatgggttttattcgagaaggattaggccaactata
agtgctgttatagaaagctttcagagatgctttgaaatgggttctgaaaaaattaaaagc
ataaagaagccattaagaatcccttctcatgttaatcagtcagcattggaacctgagtct
ggaaagaaaattcttaacccacaaagccagtttcttcaacgttggaacaaaatatttatg
atttcttgtgtgattgcattggccatagacccattgttcttttacatcccagtgattgat
ggaaaaaagaaatgccttaacgttgactttaatttagagatctctgtttgtctgtttcgt
acagccgttgatctcttctatatacttcatataatatttcaattccgtactgggtttatt
tccccttcgtctcgagtcttcggaaggggcgagttgattgatgatcctaaagccatagcc
aagagatatttgacctcttacttcgtttttgacgttctggcaattcttcctcttccacag
gtggttcttcttataatcgcctctaggaaaggccccattgcattaatcacaaaggagacg
ttgaaagctgttattatatgccaatatgttccaagagttgctcgtttatatccattgtac
cacgatgtaaatagaacttctggcaatttcactgaaacagcagagcttggagctgctcta
aatctcttcctttatatgttagccagtcatatgattggagctatttggtacttgtattca
attgaacgacaagatagctgctggcgccaggtgtgcgaaaaagatccgactaattgtaaa
catcattctttgtactgcgaacatggtaaatcgaacgccgggtttctgaataattcatgc
ccttttattgatcctgatgatataagtgtaccgaatggattcaacttcggcatagcaatt
gatgctcttcggtcaagggtggtggaagaaaagcatttttcaaagaaattcttttactgc
ttctggtggggtctgcgtaatcttagttctctgggccaaaatctcagaacaagtacttat
gtgggagagattttctttgctttcttcatatctatctctggattagttttgtttgctctt
cttattgggaatatgcagaaatatctgcaatctaaaactgttagagtagaggaaatgaga
ataaggagaagagatacagagcagtggatgtctcatcgtttgctccctgaaaatctcaag
gaccgaattagaaaatatgaacaatataaatggcaagaaacaagaggtgttgaagaagac
gctctaattcgaaaccttccgaaagatctcaggagggatataaagcatcatctttgttgg
gacctactcaagaaagttccaatgttcgagaaaatggatgagcaattgttggatgcaatg
tgtgatcgtttaaagccagtcctttgcacagagaagagcttcattctccgcgagggggat
ccaattgaagagatgctttttatcatgagaggaaagctagtttccatgaccactaatggt
ggaagaactggcttcttcaatgctgtttatctcaaggcaactgatttctgtggagaagct
cttcttacgtgggccttggacccccaatcctccacctatcttcccatctcaactagaact
gtacaagctctatcagaggttgaagcctttgctctcatggctgaggacttgaaatttttt
gcctctcaataccggcgtcttcacagcaagcagcttcagcacagtttcagattccactcg
gtacagtggagaacatgggcagcatgttttatacaagcagcttggcgccggtactgcagg
aagaaacttacaaaatccttacgcgaagcagaagatagacttcaagatgctctggcaaca
gagacgggccccactagccttgctgcaaccatctatgcatcaaagtttgcggccaatcta
ctacgaccgttgcggcagaatggtggacgcagcacgagattggctcagaggttaccacca
ctcatacctcaaaagcctactgagcctgactttacggccaaagacttctag
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