Mangifera indica (mango): 123223589
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Entry
123223589 CDS
T07684
Name
(RefSeq) protein STABILIZED1-like
KO
K12855
pre-mRNA-processing factor 6
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123223589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123223589
Spliceosome [BR:
minc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
123223589
Complex C
U5 SnRNP specific factors
123223589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_8
TPR_2
ARM_TT21_C
TPR_1
ubiquitin
FAT
PMC2NT
Motif
Other DBs
NCBI-GeneID:
123223589
NCBI-ProteinID:
XP_044502759
LinkDB
All DBs
Position
8:complement(7499941..7503441)
Genome browser
AA seq
1029 aa
AA seq
DB search
MVFITTPDSRTIFLNLNPNTTTLYSLKQTLQHQTRIPISVQHFLTSSNNSTYGDSTLLSR
LGITRYSTLTLHAPLLGGVGGTTPAAPPPPPSKPRLDFLNSKPPPNYVAGLGRGATGFTT
RSDIGPARAAPDLPDRSATTIGGAASSAGAGRGRGKPGEDEEDDEGDDKGYDENQKFDEF
EGNDVGLFANSEYDEDDKEADAVWESIDKRMDSRRKDRREARLKQEIEKYRASNPKITEQ
FADLKRKLYSLSADEWDSIPEIGDYSLRNKKKRFESFVPVPDTLLEKARQEQEHVTALDP
KSRAAGGTETPWGQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVDPKGYLTDLKSM
KITSDAEISDIKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKIAAARHLIQRGCEECP
KNEDVWLEACRLANPEEAKAVIAQGVKMIPNSVKLWLQAAKLEHDDVNKSRVLRKGLENI
PDSVRLWKAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYVNARKVLNRAREKL
PKEPAIWITAAKLEEANGNTTMVGKLIERGVRALQREGFVIDRESWMKEAEAAERAGSVV
TCQAIIKNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKA
AQLEKSHGTRESLDALLRKAVTYCPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPN
SEEIWLAAFKLEFENHEPERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERRLLNE
GLKQFPSFFKLWLMMGQLEERLGQSEQAKEAYESGLKHCPNCIPLWLSLANLEEKMNGLG
KARAVLTMARKKNPHNPELWLAAVRAESRHGNKREADILMAKALQECPNSGILWAASIEM
VSRPQRKTKSTDALKKCDHDPHVIAAVAKLFWHDRKADKARNWLNRAVTLAPDIGDFWAL
YYKFELQHGTEDTQKDVLKRCIAAEPKHGEKWQAISKAVENSHQPIEAILKKVVVALGKE
ENAAENSRH
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggtattcatcacaacgcccgattcaagaacaatctttctcaacctaaaccctaacacc
accactctttactccctcaaacaaacccttcaacaccaaacacgcatcccaatctctgtt
caacatttcttaacttcctccaacaattccacttatggcgattctacccttctttctcgg
ctgggtatcacccgttactcaaccctgaccctccacgctcctcttcttggtggtgtcggt
gggaccacccctgccgctcctccgcctccaccaagcaagcctcgccttgatttcctcaat
tcgaagccgcctcccaattatgttgctgggttgggacgtggagctaccggattcaccacc
cggtctgatattgggccggcccgggcggctcctgatctccctgaccggtccgccactaca
atcggcggtgcagctagttcggctggagcagggagagggcgtgggaaaccaggagaggac
gaagaagatgacgagggagatgataaagggtatgatgagaatcaaaagttcgacgaattt
gaaggaaatgatgtgggtttgtttgcgaattctgagtatgatgaagatgataaagaagct
gatgctgtttgggaatctattgataaaagaatggattcgcgacgaaaagataggagagaa
gctaggttgaagcaagagattgaaaagtatcgtgcttctaatcctaaaatcacagagcag
ttcgctgatttgaagaggaaattgtattcattgtcagctgatgagtgggatagtatccct
gaaatcggagattattcattgagaaacaagaagaaacggtttgaaagtttcgtgcctgta
cctgatacattgttagagaaagctagacaagagcaagagcatgtgactgctttggacccc
aagagtagagcagctggtggcacggaaactccttggggtcagacccctgttactgacttg
acggcagttggtgaagggagaggaacagttttgtcattgaaattggaccgtttgtctgat
tctgtttcggggttgactgtggtggatccgaaagggtacttgactgatttaaagagcatg
aagataaccagtgatgcagaaatctcagatattaagaaggctagattgttgttgaagagt
gtaattcaaacaaacccaaagcatccacctggttggattgcagctgccagattggaagaa
gtggctgggaagattgctgccgccagacatttgattcaaagaggttgtgaggagtgtcca
aaaaatgaagatgtttggctagaagcttgtaggcttgcaaatcctgaggaggccaaggct
gtaattgcacaaggtgtaaagatgattcctaattctgttaagttgtggttacaggctgca
aaattggagcatgatgatgttaataagagtagagttttgagaaaaggattggagaatata
cctgattcggttaggttgtggaaggctgttgtggagttagcaaatgaggaagatgctaga
ttgttgttgcatcgggcggttgagtgttgtcctttacatgttgaattgtggttagcctta
gccaggttggaaacttatgttaatgccagaaaagtgcttaatagggctagggagaagttg
cctaaagaaccagcaatctggataactgctgctaagttggaggaagccaatggcaatact
actatggtggggaagcttattgagaggggagtaagggcattgcaaagagaagggtttgtt
attgaccgagaatcgtggatgaaagaggctgaggctgctgagagagcagggtctgtggtg
acttgtcaagcaattattaagaatacaattggaattggtgtggaagaagaggataggaaa
aggacttgggtggcagatgctgaagagtgtaagaaaagagggtctattgagactgccaga
gccatttatgcacatgcccttactgtgtttttgactaagaagagtatttggcttaaggca
gctcagcttgagaaaagccatgggaccagggaaagtcttgatgctttacttagaaaagct
gttacttattgcccgcaggctgaggttctttggcttatgggtgcgaaagagaagtggctt
gctggggatgtgcctgcggcacgagctattcttcaagaagcttatgcagctatacctaat
tcagaggagatttggcttgcagcatttaagcttgaatttgagaaccatgagcctgaaaga
gcaagaatgctgcttgctaaggcaagagatatgggtggcacagaaagagtttggatgaaa
tctgctattgttgaaagagaattggggaacaacgctgaggagaggaggttgcttaatgaa
ggattgaaacaatttccatctttctttaagttgtggttgatgatggggcagctagaggag
cgacttggtcagtcagaacaagccaaagaagcttatgagtcaggtctaaagcactgtcct
aattgtattcctctgtggctttcacttgctaatctggaggagaaaatgaatgggttgggt
aaagcacgggctgtgctcacaatggctaggaagaagaatcctcacaatccagaactttgg
cttgctgcagttcgagctgaatctaggcatggaaacaagagggaagctgatatattgatg
gcaaaggcattgcaggagtgtcccaatagtggcatattgtgggctgcatcaattgagatg
gtttcccgtcctcaacggaaaaccaagagtactgatgcgctgaagaagtgtgatcatgat
cctcatgttattgctgctgtcgcgaagctgttttggcatgataggaaggctgataaagct
aggaactggctcaacagggcagttactcttgctccagatattggggatttctgggcatta
tactacaagtttgaattgcagcatggaactgaagacacccagaaggatgttttgaaaaga
tgcattgctgctgaaccaaagcatggcgagaaatggcaagcaatttccaaggccgtggag
aattctcaccagccaattgaagcaatcttgaagaaagtagttgttgcacttgggaaggaa
gagaatgctgcagaaaatagtagacactag
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