Mangifera indica (mango): 123223877
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Entry
123223877 CDS
T07684
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123223877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123223877
Spliceosome [BR:
minc03041
]
Common components
Common spliceosomal components
SR proteins
123223877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RNA_bind
Nup35_RRM_2
SET_assoc
RRM_5
RBD_RDR6
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
123223877
NCBI-ProteinID:
XP_044503269
LinkDB
All DBs
Position
8:complement(2131865..2134996)
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AA seq
270 aa
AA seq
DB search
MSRPIFVGNFEYETRQSELERVFSKYGRVERVDMKSGFAFVYFEDDRDAADAIRGLDNQP
FGYDRRRLSVEWARGERGRHREGSRPMANQRPTKTLFVINFDPIRMRERDIKRHFEPYGN
VLHVRIRRNFAFVQFETQEDATKALDATNRSKLLDRVISVEYALKDDSERDDRYDSPRRG
SYGRRGDSPYGRSPSPAYRKRPSPDYGRARSPVYDRYNGPVYDRRRSPDHGRNRGPGPVY
DKRRNPDYGRNRSPEYGRYGSRSPIRRSRS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgatttttgttggaaactttgagtacgagactcgccaatccgagctagag
cgcgtcttctccaaatatggaagggtggagcgagttgacatgaaatctggctttgctttt
gtttattttgaggatgatcgagatgctgctgatgccatccggggacttgataatcagcca
tttggttatgaccgacgcaggttgtcggtggagtgggctaggggtgaacgtggtaggcat
cgtgaagggtctaggccaatggcaaatcagaggcccactaaaaccttgtttgtgataaac
tttgatcctattcgaatgagggaacgggatataaaaaggcactttgagccctatggaaat
gtcctacatgttcggattcgacgaaactttgcatttgtgcagtttgagacgcaagaagat
gcaaccaaggcccttgatgctacaaatagaagcaagttattggacagggttatctctgtt
gagtatgctttaaaagatgatagtgagagggatgacaggtatgatagtccaagaagaggt
agttatggtaggcgtggggatagtccatatgggaggtcaccaagtcctgcttatcgtaag
agaccaagtcccgattatggccgagcccgcagcccagtttatgatcgatacaatgggcca
gtgtatgacaggcgcagaagtccagatcatgggaggaacaggggtcctggtccagtgtat
gataagcgcagaaatcctgattatgggcggaatagaagtcctgagtatggtagatacggc
agccgctcaccaattagaaggtcaagatcgtga
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