Mangifera indica (mango): 123223893
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Entry
123223893 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
minc
Mangifera indica (mango)
Pathway
minc04016
MAPK signaling pathway - plant
minc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
123223893
04075 Plant hormone signal transduction
123223893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123223893
Transcription factors [BR:
minc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123223893
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Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
PUMA_CC
DUF7050
bHLH_LHW
Bap31_Bap29_C
bHLH_INO4
Lip_prot_lig_C
RBR
Motif
Other DBs
NCBI-GeneID:
123223893
NCBI-ProteinID:
XP_044503291
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Position
8:11935182..11937552
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AA seq
653 aa
AA seq
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MTDYRLPPAVNLWTDDNGSVMEAFMTSDLTGLWPPSQSSASTPTPSKTHLPSSSQPFNQD
TLQQRLQQLIEGARESWTYAIFWQSSCDYSGASLLGWGDGYYKGEGEKGKAKIKASSAVE
QEHRKKVLRELNSLISGSTATTDDSVDEEVTDTEWFFLISMTQSFFVNGGGLPGQAFFSG
SPVWVCGPERLLNSGCERARQGQMFGLQTMVCIPLANGVVELGSTEVIVQNSDLMNKVRF
LFNFNGGYGFLALFLPNPDQGENDPSSWINDPTSTVFDIKDSAGVGAPAIGSGSGSVANN
NPQISKGIQFENPTSTSLTESPSGISLQQQQIQQSQTFFSKELNFSEYAYDNRNGNSHLL
KPESGEILNFSESKRSGNNLFSNNSHFGAEDSNKKKRSPTSLGSNDEGMLSFTSGVILPS
SGVVKSSGGGGDSDHSDLEASVVKEVDSSRIVEPEKKPRKRGRKPANGREEPLNHVEAER
QRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKNKLQNAEADKEDLQNQLESM
KREFGGGKESRPGPTTSDQDLKMSNHASKLIDMDIEVRIIGLDAMIRIQSSKKNHPAAKL
MAALKELDLEVHHASMSVVNELMIQQATVKIGSRFYSQEQLKNILAAKVGDNR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgacagactaccggttgcctcccgccgtcaatctctggaccgacgataacggttccgtt
atggaagctttcatgacctctgatttaaccggtctttggcctccttctcaatcttctgca
tccacacctaccccttccaaaactcatctcccttcgtcttcacagcccttcaatcaagac
accctccagcaacgccttcagcaattgatcgaaggcgctcgggagagctggacgtatgcc
atcttttggcaatcctcttgcgattactccggcgcctctcttttgggctggggtgatggc
tactataaaggcgaaggggaaaaaggcaaagccaaaatcaaagcttcatccgctgttgaa
caggagcaccgtaaaaaggtgctccgcgagctcaactccttgatttcgggatcaacggcc
accaccgacgattccgttgatgaagaagttaccgatacggaatggttctttttgatttct
atgactcaatcgtttttcgttaatggaggcgggctacccggccaagcgtttttcagcggc
agcccggtttgggtttgcgggccggaacggcttttgaattcgggctgcgaacgggccaga
caaggacagatgttcgggttacagacgatggtttgtatacccttagcaaatggggttgtt
gaactgggttccactgaggtgattgtgcagaactcggatctgatgaacaaggttcgattt
ttgtttaattttaatggtggatatggtttcttggccctcttcctgccaaatccagatcaa
ggtgagaatgatccttcgtcctggattaatgatcccacgtccactgtgtttgatatcaaa
gactctgccggagtaggagcaccggcgattggttccgggtcgggttctgttgctaataat
aacccgcagatttccaagggaattcagtttgagaatcctacttcaacttctttaactgaa
agcccaagtggaatttctttacagcaacagcaaattcagcagtcgcagacgtttttctca
aaagaactgaatttctctgaatatgcatatgataacagaaatgggaattctcatttgttg
aagccggaatcaggggagatattgaacttttctgagagtaagagaagtgggaataatttg
ttttcgaataattctcatttcggagcagaggacagtaataagaagaaaagatcacctacc
tccctagggagtaacgacgaagggatgctttcgtttacttctggtgtgattttgccttct
tcgggagttgtaaaatcgagtggtggcggaggcgattctgatcattctgatcttgaggct
tctgttgttaaggaggtagatagtagtaggattgtggaacctgaaaagaagccgagaaaa
cgggggagaaagcctgcaaatggaagagaagagccactgaatcatgtggaagctgagcgt
caaagaagagagaagctcaatcagaggttctatgctttgagagctgttgtacctaatgtt
tcaaagatggataaagcttcacttcttggtgatgcaatttcttatattaatgaacttaaa
aacaagcttcaaaatgctgaggctgataaagaggatctccaaaaccaattggaatcaatg
aagagagagtttggtgggggtaaagaatctcgtccaggtcctacaacatctgatcaagac
ctcaaaatgtcaaatcatgcaagtaaattgattgatatggatattgaagtgaggattatt
ggattggacgctatgatcaggattcaatcaagtaaaaagaaccaccctgcagctaagcta
atggcagccttgaaagagttggacttggaggtgcatcacgccagtatgtcagtagtgaat
gaattgatgatccaacaagccacagtgaagattggaagtcggttttactcacaagagcag
ctcaagaacatcctagcagccaaagttggcgataatcgataa
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