Mangifera indica (mango): 123223932
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Entry
123223932 CDS
T07684
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
minc
Mangifera indica (mango)
Pathway
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123223932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123223932
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123223932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
123223932
NCBI-ProteinID:
XP_044503359
LinkDB
All DBs
Position
8:6453700..6460634
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AA seq
507 aa
AA seq
DB search
MQSDNGKLFIGGISWDTNEERLKEYFGNYGEVVEAVIMKDRNTGRARGFGFVVFADPAVA
EIVIQEKHNIDGRMVEAKKAVPRDDQNMLSRNSSSIHGSSGTGRTRKIFVGGLASTVTEN
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPTRSPLGGYHYGLSRASGLFNGYTQGYTASTVGGYGLRMDGRFNPVAGGRS
GFPPFGSGYGMSMNFEPGLSPSFGASGNFNGNMSYGRGLSPYYIGNTNRFASPLGYDAGS
GGNSSFFSSVTRNLWGTGALNYNTNPPSSNSYVGSGSGSIGGSNFGNSGVNWDSSTISAQ
GGNNVSNNNVNFGYGGGDSNFGLGTGGHARNAGTTLVQTSSYASSNGGYDTVLTDLYGGG
SVYGDPTWRSSSSERDGSEPFAYGLGGGTSDVSAKNSPSFVGGYSVNKRQSNREWICLSP
RQTRADGQNHAQEVVKESLMMKIIETP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagataatggcaagttatttatcggtggaatatcttgggataccaatgaggag
cgcctcaaggaatactttggtaattatggggaggtggttgaggcagtgattatgaaggat
cgaaacacagggcgtgcacgtggattcggttttgttgtttttgctgacccagctgttgct
gagattgtcatacaggaaaagcacaacattgatggaaggatggttgaggccaaaaaagct
gttcctagagatgaccagaacatgttgagtagaaacagtagcagcattcatggttcttct
ggtacaggtcgcacaagaaagatctttgtaggaggtttagcatccacagttacagagaat
gactttaagaaatactttgatcagtttgggactatcactgatgttgtggtgatgtatgat
cacaacacccagaggccaagaggatttggattcatcacttatgattcagaggaggcagta
gacaaggtgttgctgaagacttttcatgaattgaatggtaaaatggttgaggttaagcga
gcagttcctaaagagttatcacctggccccactcgcagcccactaggtggatatcactat
ggtctaagtagggctagtggcttgttcaatggctacactcagggatatactgctagcaca
gttgggggctatggacttaggatggatggtagattcaatccagttgctggtggacgaagt
gggtttcctccatttggttctggttatggaatgagcatgaattttgagcctggcttgagc
cctagttttggagctagtggaaattttaatggtaatatgagttacggaaggggtttgagc
ccatattatattggcaatacgaatcggtttgctagtccccttggatatgatgcaggtagt
ggaggaaattcttcttttttcagctcagtgacaagaaatttgtgggggactggagccctt
aattataacacaaatcctccaagttccaattcatatgtgggatctggaagtgggagtatt
ggaggaagtaactttggcaatagtggagtcaattgggattcttcaacgatttccgctcag
ggagggaataatgtttctaacaataatgtgaattttgggtatggaggtggtgacagcaat
tttgggttgggaacaggaggacatgcaagaaatgctggaactactttggtccaaacatca
tcatatgcatcatcaaatgggggctatgatacagtcttgacagacctttatggtggtggt
tcagtttatggggatccaacatggagatcatcttcatctgagagagatggttctgaacca
tttgcttatgggcttggtggtggtacttctgatgtttctgctaaaaattctcccagtttt
gttggtggttatagtgttaataagagacagtcaaatagagagtggatttgtttgtctcca
cgccaaactagggctgacgggcaaaaccatgctcaggaagtggttaaagaatccttgatg
atgaagataatagagacaccttaa
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