Mangifera indica (mango): 123224229
Help
Entry
123224229 CDS
T07684
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123224229
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
minc04812
]
123224229
Enzymes [BR:
minc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
123224229
Membrane trafficking [BR:
minc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
123224229
Cytoskeleton proteins [BR:
minc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
123224229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_5
AAA_22
NPHP3_N
AAA_14
AAA_2
AAA_16
MIT
Mg_chelatase
TIP49
AAA_25
DUF815
nSTAND3
RNA_helicase
AAA_24
Aida_N
Motif
Other DBs
NCBI-GeneID:
123224229
NCBI-ProteinID:
XP_044503767
LinkDB
All DBs
Position
8:complement(826392..831797)
Genome browser
AA seq
487 aa
AA seq
DB search
MSFLKGIIDSLGSIFPNDNSPYESGQNPSSSTMDTGAGTLVTNERTAYKLKGYFDLAKEE
IDKAVRADEWGLVDDAIIHYNNAQRILNEAISTPVPSYISSSEVEKVKSYRQKILKWQSQ
VSDRLQTLGQRTGGTSMNKSTIPRAQTAAVSSTSNYRKKVSQNPLHLNKNNPVARNQTDK
AVNSKPLQESGSRYESNLVEMINTAIVDKSPSVKWEDVAGLEKAKQTLMEMVILPTKRRD
LFTGLRKPARGLLLFGPPGNGKTMLAKVVASESQATFFNVSASSLTSKWVGEAEKLVRTL
FMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTSNSNDLVIVMGAT
NKPQELDDAVLRRLVKRIYIPLPDENVRRLLLKHKLKGQAFSLPGGDLQRLVRDTEGYSG
SDLQALCEEAAMMPIRELGANILTVKANQLRPLRYEDFKKAMAVIRPSLNKSKWEELEQW
NLEFGSN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctcaaaggcatcattgattctctaggatcaattttcccaaacgataattcg
ccctatgaatctggacaaaaccctagctcttccacaatggatactggagcaggaacttta
gtcacaaacgaaagaacagcatacaagcttaaaggatacttcgatttagctaaagaagag
attgacaaagcggttagggctgacgaatggggtttggttgacgatgctattattcattac
aacaacgcccaacgaattttaaacgaagctatttcgactcctgttccatcttatatcagc
tctagtgaagtagagaaggtgaaatcttatcggcaaaagatattgaaatggcagagtcaa
gtgtctgatagattacagactttgggtcagcgcacaggcggcacatcaatgaacaagagc
accatccctcgtgcccaaactgctgcagtttcatcaacatcaaattacagaaaaaaagtg
tcacaaaatcctctacatttgaataaaaacaatccagttgcaaggaatcagactgacaaa
gctgtaaactctaaacctctgcaggaatctggtagcagatatgaatcaaatttggttgaa
atgataaatacagcaatagtggataaaagtccttctgtgaagtgggaagatgttgctggc
cttgagaaagctaagcaaactttaatggaaatggttattctgccaaccaaaagaagagat
ttgttcactggccttcggaagccagcaagaggtttgcttctctttggtccaccgggaaat
gggaagaccatgcttgccaaagtagtggcatcagagtcacaggcaacgtttttcaatgtt
tctgcatcttcattaacatcaaaatgggtgggcgaggctgagaagcttgtccggacactg
ttcatggttgctatatcaagacagccgtctgtaattttcattgatgaaattgatagcata
atgtcaacaaggttagctaatgagaatgatgcaagcagaaggttgaagtctgagtttctg
atacagtttgatggagttacatctaattccaatgatttagtgattgtcatgggtgctact
aataagccacaagaattggatgatgcagttcttaggagattggtgaagagaatatacata
cctctacctgatgaaaatgttaggagacttcttcttaaacacaaactgaagggccaagca
ttttccttacctggtggagacctacaaaggcttgtgagggacacagaaggatactctgga
agtgatttacaagcattatgtgaagaagctgcaatgatgccaattagagagcttggtgcc
aacattctgactgtcaaggcaaatcagctaagacctctaagatatgaagactttaagaag
gcaatggctgtaattagacccagtttaaataaaagcaagtgggaagaacttgaacagtgg
aatctggagtttggctctaattga
DBGET
integrated database retrieval system
