Mangifera indica (mango): 123224489
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Entry
123224489 CDS
T07684
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
minc
Mangifera indica (mango)
Pathway
minc03030
DNA replication
minc03410
Base excision repair
minc03420
Nucleotide excision repair
minc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123224489
03410 Base excision repair
123224489
03420 Nucleotide excision repair
123224489
03430 Mismatch repair
123224489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
minc03032
]
123224489
03036 Chromosome and associated proteins [BR:
minc03036
]
123224489
03400 DNA repair and recombination proteins [BR:
minc03400
]
123224489
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123224489
DNA Replication Termination Factors
ELG1-RFC complex
123224489
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123224489
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123224489
Check point factors
HRAD17(Rad24)-RFC complex
123224489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
Rad17
AAA_22
APOBEC4
Motif
Other DBs
NCBI-GeneID:
123224489
NCBI-ProteinID:
XP_044504104
LinkDB
All DBs
Position
8:complement(29185..32800)
Genome browser
AA seq
609 aa
AA seq
DB search
MPSPPIPRSSSPKTPTIIPPPSSRSACSARSQPKLSYRRLGNFIIPGRKSSDSCSKHSDL
TEQGLEAHNRRHAPILHNTITAHEKNSKCSPYYKGLTDASLVINRERFASSPGRESHAIT
MATSSSSSLSSFMLRMQGWSSCFTFKSLNPTTSVPLINHNHPTFSSYSISTKTPTSTSVK
EMNLNKAEKPLRERVSESSTTPSRDTNEFVWADKYQPKTLKEFICNRDKVIQLQGLVEEG
GCRNFIFEGPPGAGKRTMICAMLREEFGPDTVQTREASMVFDLKGELISSIKVNVKESVQ
HVEVNVSDLKGYEKHVILELMKEKQSKLSNKGLQSNPDNSKAIILCEADKLSTDTLLYIR
WLLERYKGLNKVFFCCSDASKLQPIKSLCTVVQLFPPSDEEIVKVLEFIAKQEGVELQQK
FAENFANKSKNNLRQAIRSFEASWQMNYPFKDDQQILTGWEDVITNIAKKIIQEQSPKQL
YIIRGKLQNLIEHDVSPEFIFKSLVEELKKHLDVGLHNCIDNLYGDYNIDDRRMFDDEKP
FVFARSSRHEEIGKRLNDPVRKNAEHFFKIEEFIAKFMSKYKTEVTHNRSEQQDTGQPHI
RSSANVGLI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtccaccaattccacgctcctcatcacccaaaactcccactattatccctcct
ccctccagccgctctgcttgttccgctcgctcccaacccaaactctcctatcggcgactt
ggaaactttataatccctggaaggaagagcagcgattcctgctccaagcattccgactta
acggagcagggtctcgaggcccataatagaagacacgcgcccattcttcataatacaatc
actgcccatgaaaagaactcgaaatgcagtccctactacaaaggacttactgatgcgtcc
cttgtcatcaatcgtgaaagatttgcatctagtcctggacgtgaaagtcatgccatcacc
atggccacttcttcttccagctctctttcctctttcatgctcaggatgcaaggatggagt
tcttgctttacctttaaatcactaaatcctactacctctgttccactaataaaccataat
catcctactttctcttcatattcaatttcaactaagacaccaacatcaacttcggttaag
gagatgaatttgaataaagcggagaagccattgagggagagagtatcagaatcatccaca
accccatccagagatacaaatgagtttgtgtgggcagacaagtaccagcccaaaacttta
aaagaatttatttgcaatcgagataaagtgattcaacttcagggcctggtggaagaggga
ggatgccggaattttatatttgaaggaccaccaggggcgggaaaaagaaccatgatttgt
gctatgcttcgagaagaatttggaccggacacagtccagaccagggaggcgtccatggtg
ttcgacttgaagggagaattaataagtagtatcaaagtaaatgtaaaggaatctgtccaa
catgtagaagttaatgtctctgatttaaaaggatatgaaaagcatgtcattcttgaactt
atgaaggaaaaacaaagcaagctatcaaataaaggtttgcagtcaaaccctgacaacagc
aaagcaattattttatgtgaagcagacaagctatcaacagataccttgctatacatcagg
tggttattagaaaggtataaagggttaaataaggtttttttctgctgctctgatgcctca
aagcttcaacccattaagtcgctttgcactgttgttcagctttttcctccttcggacgaa
gagatagttaaagttctggaatttatagctaagcaagaaggcgtagaattacaacaaaaa
tttgctgaaaattttgctaacaaatccaagaataatcttcgtcaagctattcgctcattt
gaggcctcttggcagatgaattatccgtttaaggatgaccaacaaatattaactggctgg
gaagatgtcattacaaatattgccaagaaaattattcaagagcaaagcccaaaacagtta
tatattatccgggggaagcttcaaaatctaatagagcacgacgtttctcctgaattcatt
ttcaagtctcttgttgaagaactaaaaaagcatttggatgtgggattacacaattgtatt
gacaatttatacggtgattacaatatagacgatagaaggatgtttgacgacgagaagcca
tttgtctttgcacgcagtagtcgacatgaggaaattggaaagaggttaaacgacccagtg
agaaagaatgctgaacatttttttaagatcgaagagtttatagcgaagttcatgagcaag
tataaaacagaagtgacacataatagaagtgagcaacaggatacaggacaaccgcatata
aggtcatctgcaaatgttgggctcatatag
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