Mangifera indica (mango): 123224696
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Entry
123224696 CDS
T07684
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123224696
Spliceosome [BR:
minc03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
123224696
Other components
Complex C specific factors
123224696
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
123224696
NCBI-ProteinID:
XP_044504322
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Position
9:complement(447433..450996)
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AA seq
867 aa
AA seq
DB search
MDDEQEMERFGMENDFEGGQWINGEFYFKKRKEKRTQTKDDVLYGVFASDSDSDDDGYSK
KRRKDRDFGRKADMTKPVNFVSTGTVMPNQEIDKNLKEENDDILEEDADNRPGLGIGFGS
GNSGAGLGLGFGGNRSKKTNDEAEDSDLGGDDDNFLPTAFGRKIKEGALRREREREREKS
ENKGQGRKGREIGTEDVGVFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVTPLEAKMRPK
NMGMGFNDFKEAPAAKLLDLEKLEEKKSKGQQQPVGRAKEKLWSKRTKGRKKEEYITMEE
LLAKKQEQGFEVVQKVIDMRGPQVRVLTNLENLNAEEKARENDVPMPELQHNLKLIVDLA
ELDIQKIDNDLRNERETALTLQKEKEKLQKTADEQKKQMDNMEKIVNVLGQIERENSLGT
LTLDSLANYFRDLHGRFPHDYKLCNLSCIACLYALPLFIRMFQGWDPLRSPSHKLEIVST
WKNLLQTEDSHDIWDISTPYSQLVSEVVLPAVRISGINTWDARDPEPMLRFLESWENLLP
SSVLQTILDTIIFPKLSTAVDSWDPRRETVPIHVWVHPWLPMLGHKLEGLYHIIRVKLSN
VLDAWHPSDVSAYTILSPWKTVFDSTSWEQLMRRYIIPKLQAALQEFQINPSNQKLDQFY
WVMSWASAIPIHLMVDLMERFFFAKWLQVLYHWLNTSPNFEEIHKWYMGWKGLLPQELLA
NENIRTQLNIGLDMMSQAADGMKVVQPGLRENLSYLRVLEQRQFEAQQKAAAQAQQAAAA
SHMDGTDAQREMTLKEVVEAYAQQHELLFKPKPGRTHNGQQIYGFGNISIYVDSLNQMVY
AQKEEGWTAVTLDTLLRMHNNSLARRY
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgagcaggagatggagaggttcggaatggagaacgacttcgagggaggtcag
tggataaatggcgaattttatttcaagaagcgcaaggaaaaacgaactcaaactaaagac
gatgttttgtatggcgtttttgcctctgattctgactctgacgatgatggttactccaag
aagcggagaaaagaccgtgactttggaagaaaagccgatatgacaaagcctgtcaatttc
gtttctacaggtactgtaatgcccaatcaggagattgataagaatctcaaagaggaaaat
gatgatatcttagaggaggatgctgacaaccgccctggtttaggtattggctttggatct
ggtaattccggtgctggtttaggtttaggttttggtggaaacagatctaagaaaacgaat
gatgaggctgaagatagtgatttgggcggtgatgatgataatttcttgccaacagcattt
gggaggaagataaaagagggagcactgaggagggagagagagcgggagagggaaaaatcg
gagaataagggtcaaggcagaaaagggagagaaattggcactgaggatgtaggggttttt
gagaagcatacaaagggaattgggatgaagttgctggagaagatggggtataaaggtggc
gggcttggaaagaatgagcaagggattgtgactccgcttgaggcaaagatgagaccaaaa
aatatgggtatgggtttcaatgattttaaagaagcaccagctgcaaagttgttggacttg
gaaaagttggaggaaaagaagagtaaggggcaacaacaacctgttgggagagcaaaagag
aagctttggtcaaagcggacaaaggggaggaagaaggaagagtatattaccatggaggaa
ttgttagcaaagaaacaagaacaggggtttgaggtggttcagaaggtgattgacatgcga
gggccacaagttagggttttgacaaacttggagaatttgaatgcagaggagaaagcaagg
gagaatgatgttccaatgcctgagctacagcataatctaaagttgattgtggacttggct
gagcttgatattcagaagattgataatgatctgaggaatgaaagggagactgcattgacc
ctgcaaaaggagaaggagaagctgcagaagacggcggatgaacagaagaagcagatggac
aatatggagaaaattgtaaatgttttgggtcaaattgagagagaaaattcattaggaact
ttaacattggactcactggcaaactattttagggacttgcacgggagatttcctcatgat
tataaactttgtaacttgtcatgcattgcttgcttgtatgctttgcctctgtttataagg
atgtttcaaggttgggaccctcttcggagtccatcacataaattggagattgtgtcaaca
tggaagaatctgttgcaaacagaggatagtcatgatatatgggatatatcaacaccttat
tctcaactggtttctgaagttgtcttacctgctgtgagaatatctggcatcaatacttgg
gatgcaagagatcctgagccaatgcttagatttttggagtcatgggagaatctgctgcct
tcttctgttcttcagaccatactggatacgataatttttccaaaattgtcaactgctgtt
gattcgtgggacccacgccgagaaactgttccaattcatgtttgggtgcatccatggctc
ccaatgttggggcataaattggagggtctgtatcatatcatacgtgtaaagttgagtaat
gttcttgatgcatggcatccaagtgatgtatctgcttacaccatattgtcaccatggaag
acggtgtttgattcaacaagttgggagcagctcatgcgtagatatattattccaaaattg
caagctgcacttcaagagttccaaattaacccttcaaaccaaaagcttgatcagttctac
tgggttatgtcttgggcttctgccattccaattcatctcatggttgatttgatggagagg
tttttctttgctaagtggctacaggttttgtatcactggttgaacacttctccgaacttt
gaagagattcataaatggtatatgggatggaagggacttcttccacaggaacttctagcc
aacgaaaatatccggactcaactaaatatcggtctcgacatgatgtctcaagctgctgat
ggtatgaaagtggtccaacctggcttaagggagaaccttagttatcttagggtgttggag
cagaggcagtttgaggctcagcagaaagcagctgcccaagctcaacaagcagcagcagct
tcccatatggatggcacagatgcacaacgcgagatgacattgaaagaagttgttgaggca
tatgcacagcagcatgaattactatttaagcctaaacctggaaggacacataatggtcag
caaatatatggctttggcaacataagcatatatgtggactctctaaatcaaatggtgtat
gcccagaaggaggagggatggactgcagttacacttgacacattgctgagaatgcacaat
aattctcttgcaaggagatattaa
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