Mangifera indica (mango): 123224869
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Entry
123224869 CDS
T07684
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03440
Homologous recombination
minc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123224869
03460 Fanconi anemia pathway
123224869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
minc03032
]
123224869
03400 DNA repair and recombination proteins [BR:
minc03400
]
123224869
Enzymes [BR:
minc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
123224869
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Topoisomerases
123224869
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
123224869
FA (Fanconi anemia) pathway
123224869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
123224869
NCBI-ProteinID:
XP_044504553
LinkDB
All DBs
Position
1:13881977..13912795
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AA seq
953 aa
AA seq
DB search
MSALDSTLPWREKPSNHGHKTPNFERSQTIPNFLHLPVAAMSGGGRIINVLNVAEKPSVA
KSVAGILSRNHGLRVREGRSRYNKIFEFSYAIRGQSCHMLMTSVTGHLMELEFEDRYRKW
HSCDPVDLYEAPVRKFVPEDKKDIKRTLEEEARRCKWLVLWLDCDREGENIAFEVIDVCR
AVNSHLVIRRARFSALIDREIHQAVQNLVDPNEWFSDAVDARQEIDLRIGASFTRFQTML
LKDKFHIDLATDDKNLVLSYGPCQFPTLGFVVERYWEIQSHEPEEFWTINCSHKSDEGVA
SFNWMRGHLFDYTCVVIIYEMCVRESTAIVTNVRQQEKLKYPPYPLSTIELEKRASRYFR
MSSEHTMKVAEDLYQAGFISYPRTETDGFSSRTDLHTIVQEQQGHPLWGSYAQRLLDPEA
GLWRNPGSGGHDDKAHPPIHPTKFSAGESGWSQDHHRLYELVVRHFLACVSQPAVGAETI
VEIDIAGEQFSACGRMILAKNYLDVYRFESWGGSMIPTYAHGQQFIPTTLTLDSGVTRPP
PLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVMGYDDM
GYELWKPNLRSMMENDMKEVSVGNKSRVEVLATCLQQMKACFLDARMKKAKLIEAMGIFF
ERSGGDEQRAIGEVVRRCGICQESNMVLRQNKDGNFMVGCVAYPQCRNAVWLPGSISEAA
VTSNACNSCTPGPVYLILFKFRQHEIPPGFSATHLGCIGGCDETLRQLIEICGTGSRIPA
RGRGPTVSSGNVQQSNTWQRTCIYCQQTGHTSSDCRSQFSGSRNNHSRAMNMQSGESSMQ
CTTCGTTCVLRTANTANNKGRRFYSCPLLECNFFAWEDDFDSGTRGRSNPHANISGLAST
TSRRGGRGSGSRSVGHALDMTFVSVTGDPISGRRCYVCGDPSHFANVCPNRGT
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccctcgattcaactctgccttggcgggaaaagccctcgaatcacggtcacaaa
acccccaatttcgaacgcagccaaacaataccaaactttctccacttacccgtcgccgcc
atgtctgggggaggccgtataataaacgtccttaacgtggcagagaagccgtcagtggcg
aagtcggtggccggaatcctttctcgaaaccacggtctgcgagtgcgcgagggacggtca
cgctacaacaagatattcgagttcagttacgcgattcgtggacagtcctgtcacatgctt
atgacgtccgttactggacacctcatggaacttgagttcgaggatcgttatcgtaaatgg
cactcttgtgaccccgtcgatctctacgaagcccccgtacggaaattcgtccccgaggac
aagaaggatatcaagaggacattggaggaggaagcaaggaggtgtaagtggctagtttta
tggcttgattgtgatagagaaggagaaaacatagcatttgaggtgattgacgtttgtaga
gcagtgaattctcatcttgttatacgaagggctcggttctctgcattgattgacagggaa
atccatcaggcagtgcagaatcttgttgatcctaatgagtggttttctgatgctgtggat
gctaggcaagaaatcgatctccggattggtgcttcttttaccaggttccagactatgctt
ttgaaagataagtttcatattgatttagctactgatgacaaaaatcttgttttgagttat
ggtccttgtcagtttccgacacttggttttgttgtggaacgctattgggagatacaatca
catgaaccagaagagttttggacaatcaattgttctcataaatcagatgaaggcgttgct
tctttcaattggatgcgtggacatctatttgattatacttgtgtagtcataatttatgaa
atgtgtgttcgagagtctactgccattgtcacaaatgttaggcaacaggagaagttgaag
tatcctccgtaccctttgagtactattgaactagagaaacgtgcttcaagatactttcgg
atgagttctgaacacaccatgaaggtggctgaagatttatatcaagctggttttattagc
tatcctcgtacagagactgatggcttttctagtaggactgatttgcatacaattgtgcaa
gaacaacaagggcatcctctgtggggatcgtatgctcaacgcttgttggaccctgaggca
ggtctatggagaaatcctggtagtggtggacatgatgacaaagcccatccacccattcac
ccaacaaaattttctgctggggaatctggttggagtcaagatcaccatagattgtatgaa
ttggttgttcgccattttctggcttgtgtatcacagccagctgttggggctgaaactatt
gttgaaattgacattgctggtgagcaattttctgcatgtgggaggatgatattagctaaa
aattacttagatgtttatcgctttgaatcatggggaggttcaatgatcccaacttatgcc
catggacaacagttcatcccaacaacattgactcttgattcaggggtcactagaccacca
cctcttttaagtgaagctgatttactaagttgtatggacaaggcgggcattggaacagat
gcaacgatgcatgatcacataaagaagctccttgataggttttatgcaacaaaggatgca
aacacacgcttctcaccaactaatcttggggaggcgctagttatggggtatgatgacatg
gggtatgagttgtggaagccaaatctcagatcaatgatggaaaatgacatgaaagaagtt
agtgtaggtaataaaagtagagttgaagttttggcaacttgcttgcaacaaatgaaggcc
tgctttttagatgcgaggatgaaaaaagcaaaactcatagaagcaatgggaattttcttt
gagagatctggtggtgatgagcagcgagcaattggggaagttgttcgtcgatgtggtatt
tgccaagaatcaaatatggtgcttaggcaaaacaaggatggcaatttcatggttggatgt
gtggcttatccacagtgcaggaatgctgtttggctccctggatctatatcagaagcagct
gtaacctctaacgcttgcaactcttgcactcctggtccagtttacctgattctattcaag
tttcgtcagcatgaaataccacctggcttcagtgccacccatttgggctgcattggtggt
tgtgatgagacacttagacagctaatagaaatttgtggaactggttcacgaattccagca
agagggcgaggacctactgtatcttctggtaatgttcaacaaagtaacacttggcagcgt
acttgcatttactgccagcaaacagggcatacttcaagtgattgccgttcacagttttca
ggctctcgaaacaatcactctagagcaatgaacatgcaaagtggagagtcttctatgcaa
tgtacaacttgtggaactacatgtgttttgcgaactgctaatacagcaaataacaaggga
aggaggttctattcatgtccattactagagtgcaatttcttcgcatgggaagatgacttc
gacagtggcacaaggggaaggagtaatccacatgcaaacatcagtggcttagcatctact
acaagcaggagaggtggtcgtggcagtggcagtcgaagtgtaggacatgctttagatatg
acttttgtgtcagttacaggtgatcccatatctggtagaaggtgttatgtctgtggtgat
ccatcacattttgctaacgtctgcccaaaccgtggtacttga
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