Mangifera indica (mango): 123224884
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Entry
123224884 CDS
T07684
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Pathway
minc04120
Ubiquitin mediated proteolysis
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123224884
04120 Ubiquitin mediated proteolysis
123224884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123224884
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123224884
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
U-box type E3
123224884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF1390
Motif
Other DBs
NCBI-GeneID:
123224884
NCBI-ProteinID:
XP_044504567
LinkDB
All DBs
Position
9:complement(17595636..17602296)
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AA seq
1050 aa
AA seq
DB search
MSTHKPQRSLEEIEDIILRKIFLVRLTDAADPVADARIVYLELTAAEILSEGRDLKLSCD
LMERILIDRLSGSFPAAEPAFTYLINSYRRAHEQLKKIANMKDKKVRSELESVFRQAKKL
LVSYCRIHLANPDCFGGSDEMKSNKPNVSNVSPLLPLIFSEVGGGMDGFGGSSSGGSGAQ
CPPGFLKEFFDEADWDSLDPILRGLYENLRGSVLNVSALGNFQQPLRALLYLISFPVGAK
SLVNHPWWIPKSVYMNGRVIEMTSILGPFFHVSALPDHTIFKSQPDVGQQCFSDASTRRQ
ADLSSSFTMIKTVMKGLYKDLGDVVLALLKNTETREHVLEYLGEVINKNSSRAHIQVEPL
SCASSGMFVNLSAVMLRLCDPFLDANLTKRDKIDPKYVFYGCRLDLKELTALHASSEEVA
QWINKDSPGKTDVSGLYSDGENRLLRSQEATSSSSFASEHSLQNVKLTSNVGAGKSKYTF
ICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEETLATLRAMQGQTLTPQLKLDIKRIE
EETELYSQEKLCYEAQILRDPDLIQHALSFYRLMVVWLVDLVGGFKMPLPSTCPMEFACM
PEHFVEDAMELLIFASRIQKVLDGVLLDDFMNFIIMFMASPNFIRNPYLRAKMVEVLNCW
MPRGSGSSSATATLFEGHQMSLDYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLE
YLWQVPSHRNAWTQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKEIEAEMSNTT
EWEQRPAQERQERTRQFHSQENIIRIDMKLANEDVSMLAFTSEQIVSPFLLPEMVERVAS
MLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVHIYVHLARGDAQNIFPAAISGDG
RSYNEQLFGAAAAVLRRIGEDGRVIQEFVELGAKAKAAASEAIDAEATLGEIPDEFLDPI
QYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDEELKARIVDFVR
SQELKRRGAGLNIQSMEDRIQTTSDEMLID
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgcacaagccgcagaggtcgctggaagaaatcgaggatataatcctccgcaaa
atcttcctcgtccggttgaccgacgccgccgatcctgttgccgatgctcgaatcgtctac
ctcgaattgaccgccgccgaaatccttagtgaagggagagacctaaagctgtcttgtgat
ttgatggagaggattcttatcgaccggctttccggcagcttccccgcggccgaaccggcg
tttacttatttgatcaactcgtatcggcgcgctcatgagcaacttaagaagatagccaat
atgaaggataagaaagtacgtagcgaattggagtcggtgttcagacaagcgaagaagctt
ttggtttcttattgtagaattcatttagcgaatccggattgttttggtggcagtgatgag
atgaagagtaataaaccgaatgtttccaatgtttcgccgttgttgccattgatattttcg
gaggtcggaggaggaatggacgggtttggaggaagtagtagcggtggtagtggggctcag
tgtcctccggggtttttgaaggaattctttgatgaagctgattgggatagtttggacccg
attttgagagggttatatgagaatttgaggggaagtgtgttgaatgtttctgcattgggg
aattttcagcagccattgagggcattgttgtatttgattagttttccagttggagctaag
agtttggtgaatcatccgtggtggattcccaagagtgtttatatgaatgggagagttata
gagatgacaagtattttgggtcccttttttcatgtcagcgctttgcctgatcatactatt
ttcaagagccagcctgatgttggccagcagtgtttctctgatgcctcaactcgtcgacaa
gcagatctgtcatcgtcttttaccatgataaaaacagtaatgaaaggtttatataaggat
cttggagatgttgttctcgctcttctgaaaaatacagagacaagggagcacgttcttgag
tatcttggagaggtgataaataaaaattcttccagggcccatattcaggttgaaccgcta
tcctgtgcaagttctggcatgtttgtcaaccttagtgctgtcatgcttcggctttgtgat
ccattcttagatgcaaatttaactaaaagggataaaattgatcccaaatacgttttctac
ggttgtcgtttggatctaaaagagttgactgctcttcatgcatcatcagaagaagttgct
caatggattaataaagatagtcctgggaaaacagatgtctctggactatatagtgatggt
gagaatcgattgctacgatctcaagaagccaccagttccagcagctttgcatctgaacat
tctctccagaatgtgaagctaacatcaaatgtcggtgcaggaaaatctaaatatacattt
atctgtgaatgtttctttatgactgcaagggtgctcaacttgggcctgctaaaagcattt
tctgactttaagcatctagttcaggacatttcaagagctgaagagacacttgccacttta
agagccatgcaagggcagacgctgactccacaattgaagctggatataaaacgaattgag
gaagaaactgaattgtactcacaggaaaaactttgttacgaggctcagattttaagggat
ccagatcttattcagcatgcactttcgttctatcgattaatggtggtttggttggttgac
ctggttggtggatttaaaatgcctttgccatcaacttgcccaatggaatttgcttgtatg
cctgagcattttgtggaagatgcaatggaactgcttatctttgcctcacggattcaaaaa
gtgttggacggggtcttgctggatgattttatgaacttcattattatgttcatggcaagt
ccaaattttatcaggaacccttatctcagagctaagatggttgaagttctgaactgctgg
atgccccgtggaagtggctcatcatctgccacagctactctattcgaagggcatcaaatg
tctcttgactatcttgtgaggaatctgttgaagttatatgttgacattgaattcacaggc
tctcacacacagttctatgataagtttaacattcgccacaatattgctgaacttcttgag
tacctatggcaagtccctagtcaccgtaatgcgtggacacagattgcaaaggaagaggaa
aagggtgtttatctgaatttcttgaactttctcatcaacgatagcatatatcttcttgat
gaaagtcttaacaaaattctggaactcaaagagattgaagctgagatgtcaaacacaaca
gaatgggagcaaagaccagctcaagagaggcaggagagaacccggcagttccattcacaa
gagaatattatacgaattgatatgaaattagccaatgaggatgtgagcatgttagcattc
acttctgagcagattgtgtctcctttcctacttcctgagatggttgaaagagtggccagc
atgctcaattattttttgttacaacttgtgggtccccaaagaaaatctcttactcttaaa
gaccctgaaaagtatgaattccgtccaaagcagttgctgaagcagattgtccacatatat
gtccatttggcaaggggtgatgcgcaaaacatatttccagctgctatctccggtgatggt
cgatcatacaatgagcagttgtttggtgctgcagctgctgtgcttcgtagaattggtgaa
gatgggagggttattcaggagtttgttgagcttggtgcaaaagctaaagctgctgcttcc
gaggctattgatgcggaagccacccttggagagatacctgatgaattcttagatccaatc
caatatactttgatgaaggatccagtaatcttaccttcatcaaggatcacagtggacagg
ccagttattcaaaggcatcttctcagtgatagtacggatccattcaatcgttcccatctt
acggcagacatgttgatacctgatgaagaattgaaggcaagaatcgtggactttgtgaga
tctcaagaattaaaaaggcgtggagcaggcttaaacattcagagcatggaggatagaata
cagacaaccagtgatgagatgttgattgattag
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