Mangifera indica (mango): 123225005
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Entry
123225005 CDS
T07684
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123225005
Spliceosome [BR:
minc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123225005
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
123225005
NCBI-ProteinID:
XP_044504764
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All DBs
Position
9:complement(17478502..17484216)
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AA seq
464 aa
AA seq
DB search
MSTSSQPQFRYTQTPSKVLHLRNLPWECMEEELVELGKPFGKIVNTKINVGPNRNQAFVE
FADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNKSLGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASAARNALDGRSIPRYLL
PQHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGLMQPIVGPDGKKKEP
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAMFEKNGGTQALVQYPDVTTAALAKE
SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVQDPTLLAAQQIPAVSAAQPAW
QNPQAVSMYPGSEYAATAAMQPQVPGGQVPLWNPSAQAGAQYVSFAGAYPGQTHPPTVPA
FAGAPTPPGSSPLSQPGMAMTQAGVQPNVHPGVVSTPGHPHYVR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctccagccagccacagttccgatacactcagactccgtcgaaggtcctccat
ctccgtaacctcccctgggagtgtatggaagaggagcttgtcgagctaggtaaacccttt
ggtaagatcgttaacaccaagatcaatgttggccctaatcgtaaccaggccttcgttgaa
ttcgcagacttaaatcaagccatttcaatggtatcgtattatgcttcttcttcagaacct
gcacagattcgaggtaaaactgtgtatattcagtattctaatagacatgaaattgtcaac
aacaagagtctaggagatgttcctggaaatgttctactggtaactatcgaaggtgtagaa
gctggtgacgtgagcattgatgtcattcacctggttttttctgcctttggttttgtgcac
aagatagccacttttgagaaggctgctggtttccaggcattgattcagttcactgatgct
gaaactgcatctgcagcaaggaatgcattggatggaagaagtattcccaggtatctgctt
ccacaacatgttggctcctgccacttgcgtatttcatattctgcgcacactgatttgaat
ataaagtttcaatctcatcggagcagggactatacgaatccctaccttcctgtgaatcct
acagcaattgagggtcttatgcagcctattgttggtcctgatggaaagaagaaagaacct
gagagtaatgtgcttcttgcttcaattgagaatatgcagtatgctgttacagtagatgtc
ctccatacagtattttctgcatttggcactgtccagaaaattgctatgtttgagaaaaat
ggcggaacgcaggctcttgttcaatatcctgatgtcacgacagctgcacttgcaaaagaa
tctttagagggacattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgttaaggcttacagtgataaaagtagagattacactgtccag
gaccccactttgcttgctgcacagcagatccctgctgtctctgctgcgcaacctgcatgg
cagaatcctcaagccgtgtccatgtatcctggcagtgagtatgctgccacagctgccatg
caacctcaggttcctggcggacaagtgccattatggaatccatctgcacaggcgggcgca
caatatgtatcgtttgctggtgcttatcctggtcaaacacacccaccaacagttcctgcc
tttgccggtgcaccaacacctcctggttcctcacccctgtcacaacctggtatggcgatg
actcaggcaggtgttcagcctaatgtacatcctggtgttgtgtcaacaccgggtcaccct
cattatgttcgatga
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integrated database retrieval system
