Mangifera indica (mango): 123225517
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Entry
123225517 CDS
T07684
Name
(RefSeq) ubiquitin receptor RAD23c-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
minc
Mangifera indica (mango)
Pathway
minc03420
Nucleotide excision repair
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123225517
09124 Replication and repair
03420 Nucleotide excision repair
123225517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
minc03051
]
123225517
03400 DNA repair and recombination proteins [BR:
minc03400
]
123225517
Proteasome [BR:
minc03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
123225517
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
123225517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Dsc3_N
CUE
Rad60-SLD_2
UBA_RAD5A
Crinkler
Ubiquitin_5
UBA_3
TECR_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
123225517
NCBI-ProteinID:
XP_044505433
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Position
9:16750682..16761068
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AA seq
383 aa
AA seq
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MKVFVKTLKGTHFEIEVKPEDKVAELKKNIESVQGADVYPAAQLMLIHQGKVLKDETTLE
ENKVAENSFVVVMLTKSKVSSSGASTASVAPANLAQPTTTPPAVPAQPSTTHQIPAPAVA
MPQAVPESTQPAALSVSSSGSDVYGQAASNLVAGSNLETTVQQILDMGGGIWDRETVVRA
LRAAYNNPERAVEYLYSGIPEQTGVLPVSRAPAGGQPVNPPAHVQQPAAPAGGPNANPLD
LFPQGLPNMGSNASAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPGLMRLIQ
EHQADFLRLINEPVEGGEGNILGQLASAMPQALTVTPEEREAIERLEAMGFDRALVLEVF
FACNKNEELAANYLLDHINEFED
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgttaagactttgaagggaactcacttcgagatcgaagtgaagcctgaa
gacaaggttgccgaactcaagaaaaacatagaaagtgtacaaggtgcagatgtctatcca
gctgcgcaactgatgcttattcatcagggaaaagttctgaaagatgaaacaaccctggaa
gagaacaaagttgctgaaaacagttttgttgttgtcatgctgaccaagagtaaggtttca
tcaagtggagcctcaactgcttcagtggcaccagcaaatctggctcaaccaactacaact
ccacctgctgtaccagcacagccatccacaacacatcagattcctgcaccagctgtggca
atgccacaggctgtacctgaatctacccagcctgcagctctttctgtctccagttcagga
tcagatgtatatggtcaagctgcgtcaaatcttgttgcgggaagtaatttagaaactact
gttcaacagatacttgatatgggtggaggtatttgggacagggaaacagttgtccgtgct
ctacgtgcagcatataacaaccctgaaagagctgttgaatatctgtattctggcattcct
gaacaaactggagttctacctgtttctcgagctcctgctggtgggcaacctgttaacccc
ccagcccatgttcagcaaccagcagcacctgctggtggtcccaatgcaaacccactggat
ctttttcctcagggccttccgaacatgggttcaaatgctagtgcaggtaccttggatttc
ttgcgcaacagtcaacagttccaagccttgcgagctatggtgcaagcaaatccccaaatt
ttgcagcctatgcttcaggagcttggaaagcaaaatccagggcttatgaggctcatccaa
gagcatcaggctgacttcttgcgtttgattaatgagcctgttgaaggcggcgaggggaac
attctgggtcagttggcctcagcaatgccacaggctttgactgtgacccctgaagagaga
gaagcaattgagcgtcttgaagctatgggctttgatcgtgcccttgtgttggaggtgttc
tttgcatgtaacaagaacgaggagttggcagccaactatcttttagatcatatcaacgag
tttgaggattga
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