KEGG   Mangifera indica (mango): 123225569
Entry
123225569         CDS       T07684                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
minc  Mangifera indica (mango)
Pathway
minc03013  Nucleocytoplasmic transport
minc03015  mRNA surveillance pathway
minc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123225569
  09122 Translation
   03013 Nucleocytoplasmic transport
    123225569
   03015 mRNA surveillance pathway
    123225569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123225569
   03041 Spliceosome [BR:minc03041]
    123225569
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     123225569
    TREX complex
     123225569
Spliceosome [BR:minc03041]
 Complex C
  Other components
   EJC/TREX
    123225569
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123225569
SSDB
Motif
Pfam: RRM_1 FoP_duplication YHR127W_C RRM_11
Other DBs
NCBI-GeneID: 123225569
NCBI-ProteinID: XP_044505556
LinkDB
Position
9:complement(16093252..16098265)
AA seq 279 aa
MATNVDMSLDDIIKSRKKNERVRGQGGALRGRGRGRGRGRGVPGSSFNNGGGRMLGPVRR
GPLTVKARPSSYTIAKSFRRTKNFPWQHDLFEDSLRAAGISGIEVGAKLYISNLHVGVTN
EDIRELFSEIGELKRYAIHYDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKLMKIE
IVGPNAEVPISARVNVSGVNGRRKRTVVMTPASGRPGPSAAINRGSGQNRRGGLRNNRGG
GRGGGRGRGIVQGKKKPVDKSADELDKELDKYHAEAMQT
NT seq 840 nt   +upstreamnt  +downstreamnt
atggctacaaatgtggatatgtctcttgatgacataataaagagcaggaaaaagaatgag
agagttagaggacaaggtggggcccttcgtgggcgtggccgcggccgcggtcgtggccgt
ggtgtcccgggcagttcttttaataatggtggtggaagaatgctggggcctgttcgtaga
ggtcctctcacagtgaaagctcgaccatcatcatataccattgccaagtcttttcgcaga
accaagaattttccctggcaacatgatttgtttgaagacagccttagagctgcaggaata
tctggaatagaagttggcgcaaagttatatatttcaaacttgcatgttggagtaaccaat
gaagatataagggaacttttctctgagattggagaactgaagcgatatgccattcattat
gacaaaaatggtcgtcccagtggatcagctgaagttgtgtataccagaagaagtgatgca
tttgcagcacttaagcggtataacaatgtattgcttgatggaaagctcatgaagattgaa
attgtgggccccaatgcggaagtgcctatctcagctcgtgtgaatgtaagcggggtgaat
ggaaggcggaagaggacagtggttatgacgccagcatcaggtcgaccagggccctcagct
gcgataaaccgtggttctggtcagaaccgtcgtggaggtcttaggaataaccgtggaggt
ggacgtggtggtggtcgtggacgcggtattgtccaggggaagaagaagcctgttgataag
tcagctgatgaactggacaaagaactggacaaatatcatgctgaagcgatgcagacttag

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