Mangifera indica (mango): 123225821
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Entry
123225821 CDS
T07684
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
minc
Mangifera indica (mango)
Pathway
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123225821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123225821
03009 Ribosome biogenesis [BR:
minc03009
]
123225821
04131 Membrane trafficking [BR:
minc04131
]
123225821
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
minc04147
]
123225821
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123225821
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
123225821
Membrane trafficking [BR:
minc04131
]
SNARE
SNARE associated proteins
Others
123225821
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123225821
Exosome [BR:
minc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123225821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Viral_helicase1
Vps4_C
AAA_7
NACHT
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
123225821
NCBI-ProteinID:
XP_044506034
LinkDB
All DBs
Position
9:complement(13866910..13871358)
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AA seq
806 aa
AA seq
DB search
MTQPAESSNASSGKRDFSTAILERKKSPNRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEQPKIRMNKVIRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDVYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPLKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFRSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDEVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDVRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRRDN
PEAMDEDVEDEVPEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
AGGGATSGSDPFSTSAGGADDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgactcagccggctgaatcctccaacgcgagttcggggaagagggacttctccacggcg
attttggagaggaaaaaatcgcctaatcgtctgatcgttgacgaggctgttaacgatgat
aactccgttgtcgctttgcacccagataccatggaaaagctccagcttttccgcggcgat
accattctcatcaaaggaaagaaacgaaaagatactatctgcattgctcttgctgacgat
acatgcgagcagccaaaaataaggatgaacaaggttattagatcaaatcttagggttcga
cttggggatgttgtctctgtgcaccagtgcccagatgttaagtatggcaagcgtgttcac
attcttccaattgatgataccattgaaggtgtaactgggaatctgtttgatgtttacttg
aaaccttatttcttggagtcttatcgccctgttaggaaaggagatctgttccttgtcagg
ggaggaatgaggagtgttgagttcaaggtcattgaaactgatcctggggaatactgtgtt
gttgctcccgacactgaaattttctgtgagggggaacctttgaagagggaagatgaggat
aggttggatgaagttggttatgatgatgttggtggtgttcgtaagcagatggctcagatt
cgtgagttagtggaactgccattaaggcatcctcagctctttagatcaattggtgtgaag
ccaccgaagggtatcttactttatggacccccaggttcaggaaagactttgatagccaga
gctgttgcaaatgaaactggtgctttctttttttgcattaatgggccagaaattatgtcc
aaattggctggagagagtgaaagcaatctcaggaaggcatttgaagaagctgagaagaat
gctccatctataatctttattgatgagatcgattccattgctcccaagcgtgagaagaca
aatggtgaagttgaaagacgtattgtttctcagcttttaactcttatggatgggctcaaa
tcacgagcacatgttattgttattggggctaccaatcggccaaatagtattgaccctgct
ttgagaaggtttggtagatttgatagggagatagacattggtgttccagatgaagttggg
cgtcttgaagttcttcgcatccataccaagaacatgaagctgtctgatgaagttgattta
gaaaggattgctaaagatactcatgggtatgtcggtgctgaccttgctgctctgtgtact
gaagctgcattgcaatgcatcagagagaaaatggatgtgattgatttggaagatgaaact
attgatgcggagatacttaattctatggctgttacaaatgagcactttcaaactgcactt
ggaactagcaatccctctgctttgcgtgaaactgttgttgaagttcccaatgtcagctgg
gaggacattggaggccttgaaaatgttaagagggagcttcaggagactgttcaatatcct
gtggagcatcctgagaagtttgagaaatttggcatgtcaccctcaaaaggtgtccttttc
tatggtcccccgggctgtgggaaaactctacttgcaaaggcaattgctaatgaatgccaa
gcaaatttcattagtattaaaggccctgaactgctaaccatgtggtttggtgaaagtgaa
gccaatgttcgggaaatatttgacaaggctcgacaatctgcaccatgtgttcttttcttc
gatgagcttgactctattgcaactcagaggggaagcagtgttggggatgctggtggtgct
gccgatagagttttgaatcaactcctaactgaaatggatggcatgtcagctaaaaagaca
gttttcatcattggggccacaaatagacctgacatcattgacccagcacttttgcgtccg
ggtcgtcttgaccagttaatttatattcctctaccagatgaggattcacgccatcaaatc
ttcaaagcctgtttgagaaagtcacctgtctcaaaggatgtcgatgttagagcattagca
aagtatactcagggcttcagtggggcagatattaccgagatatgccagcgagcttgcaag
tatgccattagagagaacatagagaaggatattgagaaggagagaagaagaagggacaat
cctgaagctatggatgaggatgttgaggatgaagtgccagagattaaggctgctcatttt
gaagagtccatgaagtttgctcgcaggagtgtcagcgatgctgatatccgcaaatatcag
gcatttgctcaaaccttgcagcagtctaggggtttcggaagtgaatttaggttttcagag
gcagggggaggggctactagtggatctgatccattctcaacttctgcaggtggagcggat
gacgatgatttgtatggttag
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integrated database retrieval system