KEGG   Mangifera indica (mango): 123225821
Entry
123225821         CDS       T07684                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
minc  Mangifera indica (mango)
Pathway
minc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123225821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123225821
   03009 Ribosome biogenesis [BR:minc03009]
    123225821
   04131 Membrane trafficking [BR:minc04131]
    123225821
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:minc04147]
    123225821
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     123225821
Ribosome biogenesis [BR:minc03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    123225821
Membrane trafficking [BR:minc04131]
 SNARE
  SNARE associated proteins
   Others
    123225821
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    123225821
Exosome [BR:minc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123225821
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_2 CDC48_2 AAA_5 AAA_22 AAA_33 AAA_14 TIP49 NPHP3_N RNA_helicase nSTAND3 AAA_17 Mg_chelatase AAA_28 ATPase_2 AAA_18 Parvo_NS1 IstB_IS21 ABC_tran Viral_helicase1 Vps4_C AAA_7 NACHT NB-ARC AAA_24 TsaE DUF815 Zeta_toxin Zot
Other DBs
NCBI-GeneID: 123225821
NCBI-ProteinID: XP_044506034
LinkDB
Position
9:complement(13866910..13871358)
AA seq 806 aa
MTQPAESSNASSGKRDFSTAILERKKSPNRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEQPKIRMNKVIRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDVYLKPYFLESYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPLKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFRSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDEVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDVRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRRDN
PEAMDEDVEDEVPEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
AGGGATSGSDPFSTSAGGADDDDLYG
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgactcagccggctgaatcctccaacgcgagttcggggaagagggacttctccacggcg
attttggagaggaaaaaatcgcctaatcgtctgatcgttgacgaggctgttaacgatgat
aactccgttgtcgctttgcacccagataccatggaaaagctccagcttttccgcggcgat
accattctcatcaaaggaaagaaacgaaaagatactatctgcattgctcttgctgacgat
acatgcgagcagccaaaaataaggatgaacaaggttattagatcaaatcttagggttcga
cttggggatgttgtctctgtgcaccagtgcccagatgttaagtatggcaagcgtgttcac
attcttccaattgatgataccattgaaggtgtaactgggaatctgtttgatgtttacttg
aaaccttatttcttggagtcttatcgccctgttaggaaaggagatctgttccttgtcagg
ggaggaatgaggagtgttgagttcaaggtcattgaaactgatcctggggaatactgtgtt
gttgctcccgacactgaaattttctgtgagggggaacctttgaagagggaagatgaggat
aggttggatgaagttggttatgatgatgttggtggtgttcgtaagcagatggctcagatt
cgtgagttagtggaactgccattaaggcatcctcagctctttagatcaattggtgtgaag
ccaccgaagggtatcttactttatggacccccaggttcaggaaagactttgatagccaga
gctgttgcaaatgaaactggtgctttctttttttgcattaatgggccagaaattatgtcc
aaattggctggagagagtgaaagcaatctcaggaaggcatttgaagaagctgagaagaat
gctccatctataatctttattgatgagatcgattccattgctcccaagcgtgagaagaca
aatggtgaagttgaaagacgtattgtttctcagcttttaactcttatggatgggctcaaa
tcacgagcacatgttattgttattggggctaccaatcggccaaatagtattgaccctgct
ttgagaaggtttggtagatttgatagggagatagacattggtgttccagatgaagttggg
cgtcttgaagttcttcgcatccataccaagaacatgaagctgtctgatgaagttgattta
gaaaggattgctaaagatactcatgggtatgtcggtgctgaccttgctgctctgtgtact
gaagctgcattgcaatgcatcagagagaaaatggatgtgattgatttggaagatgaaact
attgatgcggagatacttaattctatggctgttacaaatgagcactttcaaactgcactt
ggaactagcaatccctctgctttgcgtgaaactgttgttgaagttcccaatgtcagctgg
gaggacattggaggccttgaaaatgttaagagggagcttcaggagactgttcaatatcct
gtggagcatcctgagaagtttgagaaatttggcatgtcaccctcaaaaggtgtccttttc
tatggtcccccgggctgtgggaaaactctacttgcaaaggcaattgctaatgaatgccaa
gcaaatttcattagtattaaaggccctgaactgctaaccatgtggtttggtgaaagtgaa
gccaatgttcgggaaatatttgacaaggctcgacaatctgcaccatgtgttcttttcttc
gatgagcttgactctattgcaactcagaggggaagcagtgttggggatgctggtggtgct
gccgatagagttttgaatcaactcctaactgaaatggatggcatgtcagctaaaaagaca
gttttcatcattggggccacaaatagacctgacatcattgacccagcacttttgcgtccg
ggtcgtcttgaccagttaatttatattcctctaccagatgaggattcacgccatcaaatc
ttcaaagcctgtttgagaaagtcacctgtctcaaaggatgtcgatgttagagcattagca
aagtatactcagggcttcagtggggcagatattaccgagatatgccagcgagcttgcaag
tatgccattagagagaacatagagaaggatattgagaaggagagaagaagaagggacaat
cctgaagctatggatgaggatgttgaggatgaagtgccagagattaaggctgctcatttt
gaagagtccatgaagtttgctcgcaggagtgtcagcgatgctgatatccgcaaatatcag
gcatttgctcaaaccttgcagcagtctaggggtttcggaagtgaatttaggttttcagag
gcagggggaggggctactagtggatctgatccattctcaacttctgcaggtggagcggat
gacgatgatttgtatggttag

DBGET integrated database retrieval system