Mangifera indica (mango): 123225836
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Entry
123225836 CDS
T07684
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123225836
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
123225836
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
DmmA-like_C
Neurexophilin
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
DUF6477
Motif
Other DBs
NCBI-GeneID:
123225836
NCBI-ProteinID:
XP_044506066
LinkDB
All DBs
Position
9:3763491..3775430
Genome browser
AA seq
699 aa
AA seq
DB search
MQPMLKVETQVFNFSSSQSSVLPVPGLRVLKISISSSLSQHKEILLCNGAASIVGQCIIQ
LAKFRGIHLISSEVVIFFWRRMVWCTHCSKNIIGIRPYDSQLSCELCGRVLDYYNYSTEV
TFVKNASGQSQLSGNLIRTIQSEYGASRERLLERAFDDMRQMKNALGIGDSDEIVHIAKR
LYGMAVARNFTRGRRAEQVQASCLYFACREKMKPFLLIDFANYLNVNVYELGGVYLQLCQ
VLYLADESNIQKQLDPSIFLPKFTDRLLPGGDKKVCSTARDILASMKRNWITTGRKPSGL
CGAALYVSALTHGLKFSKSDIVKIVHICEATLTKRLTEFENTDSGSLTIEDFLARNKELQ
GSYSTNHPSSVSKESSLTEVLCKHKDTGKPFAYGLCRSCYDEFMTISEGLEGGADPPAFQ
AAERERMAKESAEENTLFEEELDSPVMSKAAKVKLVEPQSNGLSGAVRKEATSNGDDYSK
SPRHDAGTEASDESDNFSDIDDLEVDGYLHNEEEQHLKKIIWEEMNREYVEEQAAKEAAA
AAAREAFEASFKGNPEELKAARELAAAAQANVAKYKKEKQQKRAAEAKNTAPAQTALEAT
RQMLNKKRLSSKINYEVLEKLFEDSEDADNTKKPRTESQDNDDKLAGTGKKEHKWDDTLK
DGDLDGEDDYNDEQDVEEMFYNELDYENQDDTFDLEDDY
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccatgctcaaagttgaaacccaagtattcaatttctcctcctctcagtcctct
gtgcttccggttccgggtttgagggttctaaaaatctcaatctcatcttcactttcacag
cacaaggagattctattgtgcaatggtgctgcaagcattgtaggacagtgcataattcag
cttgcaaaatttcgtggcatccatttaatatcatccgaggtagttatttttttttggaga
agaatggtgtggtgtactcactgttccaaaaatattattggaatccgtccttatgattct
caattaagttgtgaactgtgtgggagagttctagactattacaattattccactgaagtg
acatttgttaagaatgcatctgggcagagtcaattgtcaggaaatttgataagaactatt
caaagtgaatatggagcctcccgggagcggttattggaacgagctttcgatgacatgaga
caaatgaagaatgccttaggtatcggtgatagtgatgagatagttcacatagctaaacgt
ctctatggaatggctgttgcacggaatttcactagggggcgtcgagcagagcaagtacaa
gcttcttgtctatactttgcatgcagggagaaaatgaagccatttcttttgattgacttt
gcaaattacttaaatgtcaatgtttatgagctgggtggtgtatatttgcagctgtgccaa
gtgttgtaccttgcagacgaatccaatatacagaaacaacttgatccttccatatttttg
cctaaatttactgaccgattactaccaggaggggataagaaggtttgcagtactgctcgg
gatatcttggctagcatgaaacgaaattggattacgacagggagaaaacctagtggattg
tgtggtgctgctttgtacgtatctgcacttacacatggtctcaagttctccaagtcagac
attgtgaaaattgtacatatatgtgaagctacactcacaaagcggttgactgaatttgag
aacacagattctggaagcttaacgattgaggacttcctagctaggaataaggagctgcaa
ggaagttactcaactaatcaccccagttctgtgtcgaaagaatcaagcttaactgaggtt
ctttgcaaacataaggatactggtaaaccatttgcatatgggctttgtagaagttgttat
gatgaatttatgacaatttcagaaggacttgagggaggagcagatcctccagctttccag
gctgctgaaagagagagaatggccaaagaatctgctgaggaaaatacactttttgaggaa
gaactagacagcccggttatgagcaaggctgcaaaagtaaagttggtagagccacaaagt
aatgggctttcaggagctgttagaaaggaggcaactagtaatggtgatgattatagtaaa
tcacccagacatgatgctggtactgaagcttcagatgaatcagataacttttcggacatt
gatgatcttgaggttgatggctaccttcataatgaggaggagcaacatctcaaaaaaata
atttgggaagaaatgaaccgggagtatgttgaggaacaagcagcaaaggaagcagctgca
gcagctgccagagaagcctttgaggctagtttcaagggcaatcctgaggaattaaaagct
gcaagggagcttgctgctgctgctcaagctaatgtggccaaatataagaaggaaaaacaa
caaaaacgagctgcagaagcgaaaaacactgctcctgctcagactgcattggaagccact
cgccaaatgctgaataaaaagagactcagctccaaaatcaactatgaagtgctggagaaa
ctttttgaggattctgaggatgcagataataccaaaaaaccgcgaactgagtcacaagac
aatgatgacaagttggccggtacagggaaaaaagagcataagtgggatgatacattaaaa
gatggtgacctggatggagaagatgattacaatgatgagcaggatgtggaagaaatgttt
tataatgagctggattatgaaaatcaagacgacacttttgatctcgaagatgactactaa
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