Mangifera indica (mango): 123225979
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Entry
123225979 CDS
T07684
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
minc
Mangifera indica (mango)
Pathway
minc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123225979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123225979
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123225979
mRNA degradation factors
5'-3' decay
Decapping complex
123225979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
WH1
Motif
Other DBs
NCBI-GeneID:
123225979
NCBI-ProteinID:
XP_044506318
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All DBs
Position
1:21127178..21131062
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AA seq
364 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRIDPFIEEILITATHVTFYEFNIESNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTENLVENILGDFEYEVKVPYLLYRNASQEVNGIWFYNP
HECDKVANLFSRVLNAYSKVPQKPKVSVSKSEFEELEAVPSPSIMEGPLEPTSTASTVTD
PPDDPSFENFFSAAGTVGNNAPNLRQPYHSSATIPLFSNAPTAVPSSAPTPQVQSLAPSA
SSPTVVLHDTPDPISSSNRVTNLVKPSFFAPPSSSALIIPPTSSIPTAAALQLPLNLQRP
YGTPMLQPFPPPTPPPSLTPAGAPTSSDRHLITREKVHDALLMLVQDDQFIDQFYQALLK
VHHS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagacgggaaaattgatgccgaatctggaccagcaaagcacgaaaatgctaaat
ctaactgtactccagcgaatcgatccttttattgaagagattttgatcacggccactcac
gtcaccttctatgagttcaacatcgagagcaatcaatggagtcgcaaggatgttgaagga
tctctttttgtggttaaacggaatactcagccgcggtttcaatttattgtgatgaatcga
cgaaatacagaaaatctagtggagaatatattgggagattttgagtatgaagttaaagtt
ccatatttgttataccgaaatgcatcccaagaagttaatggaatctggttttataatcct
catgaatgtgacaaggttgcaaatctctttagtagagttcttaatgcatactcaaaagtt
cctcaaaagccaaaagtatctgtgagcaaaagtgagtttgaggaacttgaagcagtccca
agcccctctataatggaaggccctctggagcctacatcaactgcctctactgtcactgat
cctcctgatgatccatcttttgaaaacttcttcagtgcggctggtactgttggaaataat
gctcctaatttaaggcagccctatcattcttctgcaaccattcctttgttctcgaatgca
cctactgctgttccctcttctgcaccaactccacaagtacagtcccttgctccttcagcc
tcatcgcccacagttgttctccatgacacacctgacccaatcagtagtagtaaccgtgtc
actaatcttgtgaaaccctcattttttgcacctccttcctcatcagcgttaattatacca
cctacttcatctataccaactgctgctgctcttcaactgcccttgaatctgcaacgccca
tatggaactccaatgcttcaaccctttccaccacctactccacctccatctcttactcct
gcaggagcccctacttctagtgatagacatcttattaccagagagaaagttcatgatgca
cttctaatgcttgttcaggatgatcaatttatagaccagttttatcaagcattgctgaaa
gtacaccactcataa
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