Mangifera indica (mango): 123226008
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Entry
123226008 CDS
T07684
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123226008
03036 Chromosome and associated proteins [BR:
minc03036
]
123226008
Enzymes [BR:
minc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123226008
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-60S particles
Helicases
123226008
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
123226008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
123226008
NCBI-ProteinID:
XP_044506360
LinkDB
All DBs
Position
9:complement(2626560..2631362)
Genome browser
AA seq
698 aa
AA seq
DB search
MPSLALVDVNKTVEEKKMKKKIALQSLDETELSAEKKKKDSKNKADDSERSKKKESKKRK
VMEEDDEERSETSSELGEPVNLKSEKKKKKKTKVEGEVQEQEEKSENPNAIMRFRISEPL
REKLKSKGIESLFPIQASTFDMVLDGSDLVGRARTGQGKTLAFVLPILESLVNGPTKGLR
KTGYGREPSVLVLLPTRELAKQVHEDFDVYGGAMGLSSCCLYGGAPYHSQESKLKKGVDI
VIGTPGRVKDHIERRNIDLTSLKFRVLDEADEMLRMGFVDDVELILGKVKDANKVQTLLF
SATLPDWVKHIASKFLKPNKKTIDLVGNEKMKASTNVRHFVLPCSSTARAQVIPDIIHCY
SSGGRTIIFTETKESASQLADVLPGARALHGDIQQSQREVTLSGFRSGKFMTLVATNVAA
RGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPRKSNVSRIERESGVK
FEHISAPQPADIAKAAGVEAAETITQISDSVIPVFEKTAQHLLDSSGLSAVELLSKALAK
AAGYTEIKSRSLLGSLENHVSVLLEAGKPIYTPSFAYGVLRRFVPEEKVESVKGMTLTAD
GNGAVFDVPVEDLDLFLSGQENAANVSIEVLKALPRLQEREQSRGRFGGGGGSFGRGGGR
FSGGRGGGFSGGRGGGFSDRRTNRFSGSGRGGNNGRRW
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgccttctttagcactcgttgacgttaataaaacggtagaagagaagaagatgaagaag
aaaatagctcttcaaagcttagacgaaactgagctttcggcggaaaagaagaaaaaggac
tcaaagaataaggcggatgattctgaaaggtctaagaagaaggagagcaagaagcgaaaa
gttatggaagaagacgacgaagaaagaagtgaaacgagctctgaattaggcgagcctgtg
aatttaaaatcggagaagaagaagaaaaagaaaacgaaagtagaaggtgaggtgcaagag
caggaggagaagagtgagaatcctaatgctattatgcggtttcgaatatcggaaccgttg
agagagaaactcaagtctaagggcattgagtctctgttcccaattcaggcctccactttt
gatatggtactggatggctctgacttagttggacgtgcacgcactggccagggaaaaaca
ctggcctttgtgttgccaatcttagaatcgctagtcaatgggccaacaaaaggattgagg
aaaactggatatggcagggaaccaagcgtgttggtacttttaccgactagagaattggct
aaacaggtgcatgaagactttgatgtttatggtggggcaatggggctatcctcatgttgc
ttatatggaggtgctccctatcattctcaggagtctaaattaaagaaaggagttgatata
gtcattggaacaccaggccgtgtcaaggatcacatagagaggagaaacattgatttaact
tcattgaagtttcgggtccttgatgaagctgatgaaatgcttaggatgggttttgttgat
gatgtcgaacttattcttggcaaagtcaaggatgcgaataaagttcagacgcttctcttc
agtgcaaccctgcctgactgggtgaaacatatcgcttctaagtttctcaagccaaataag
aaaaccattgatcttgttgggaatgagaaaatgaaggctagtacaaatgtaagacatttt
gttcttccctgttccagcacagcgagggctcaagttattcctgatattattcattgttat
agcagtggaggccgcacaattattttcactgagacaaaggaatctgcttctcaactagct
gatgtgttaccaggagcacgggcattacatggggacatacagcagtctcagcgtgaggtc
acactttctggtttcaggtcaggcaagtttatgactttggtggccactaatgtggcagca
cgagggttagacatcaatgatgtgcagttaattatccagtgtgaacctcctcgtgatgta
gaagcctacattcatcgatctggacgtacaggaagagcaggcaacactggagttgctgtt
atgctttatgatcctagaaagtcaaatgtgtctaggatagaaagagaatctggtgtgaaa
tttgagcacatatctgcacctcaaccagctgatatagctaaagctgctggtgtggaagct
gcagaaacaataacccaaatttcagacagtgtaattcctgtattcgagaaaactgcccag
cacctactggactcatctggtctatcagcagtggaattgctttcaaaagcacttgccaag
gctgctggttatactgagataaagagcagatcacttcttggctctttggagaaccatgtt
tcagtgcttcttgaagctggaaagcccatctacacaccatcctttgcttacggtgtactg
agaagatttgtgcctgaggagaaagtagagtcagtgaagggtatgactctcacagctgat
ggaaatggtgctgtgtttgatgtgccagtggaagatttggacttgtttctttctggccag
gaaaatgcggctaatgtgagcatagaagtgttgaaagcattgccacgcttgcaagaaaga
gaacagtcaagggggagatttggtggtggtggtggcagctttggtagaggtggtggtaga
ttttccggtggcagaggtggtggattttccggtggcagaggtggtggattttctgataga
agaactaacagattttctggcagtggtagaggcggcaataacggcaggaggtggtga
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