Mangifera indica (mango): 123226077
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Entry
123226077 CDS
T07684
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123226077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
minc03400
]
123226077
Enzymes [BR:
minc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
123226077
DNA repair and recombination proteins [BR:
minc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
123226077
SSDB
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Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
123226077
NCBI-ProteinID:
XP_044506483
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Position
9:7584174..7591176
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AA seq
557 aa
AA seq
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MNQVLQLGSKVFIFYTSKQVISSFEATPRNLRIGTLFTWRTRAMRSKSLVSNSSKPVSSL
QEVNKMTGGEMGITPTSDEGFVKEDGEISRATEEKKHKKLKGLVSTSTNSEKIFEGDGVE
SNSLNIQSIRDDPGRIEIMTVQELRANLRSIGVPAKGGKLALMSALKDYVEKKIEDENSH
VEVQEAGSISSERKSLKRKGKNRSGQDHVQAINSVSEVSVVKQNKRKVKQSPVEDKQVEL
NATIITTEQMMSIKTDGISVQSEPWTILVHKKPQKGWIPYNPRTMRPPQPSKDTKSLRLM
SWNVNGLRGLLKLEGFSALQLAQRENFDVLCLQETKLQEKDVESIKHSLLEGYENSFWTC
SVSKLGYSGTAIISRIKPLSVTYGLGIDDHDDEGRLVTAEFDSFYLLNAYVPNSGDGLKR
LSYRIMDWDPSLGRYMKELEKKKPVILTGDLNCAHEEIDIFNPAGNKRSAGFTDEERQSF
GKNFLSQGFVDTFRAQHPGVVGYTYWGYRHGGRKNNKGWRLDYFLVSKSIANQVHDSYIL
PDIGGSDHCPIGLVLKH
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagtactgcaattaggctccaaagttttcatcttttacaccagtaaacaggtc
attagtagctttgaagcgacaccaagaaatttgagaattgggacattgttcacttggaga
acaagagcaatgaggtctaaatcacttgtttcgaactcttcaaaacccgtgtcatcactg
caggaagttaacaaaatgacaggaggagaaatgggtattaccccaacttctgatgagggt
tttgtcaaggaagatggtgagataagtagagcgactgaagaaaagaaacataaaaaattg
aaaggattagtgagtacaagcacaaattctgagaagatttttgagggagatggtgtggaa
agtaattcacttaatattcagagtatcagggatgatcctgggagaattgaaatcatgaca
gtacaagaactcagagctaatttgaggagtattggggtccctgccaaaggtggtaaactt
gctcttatgtctgccttgaaggattatgtagagaaaaagatagaagatgaaaattctcat
gtagaagtgcaagaagcaggctccatttcttcagaaagaaaatctttaaaaaggaagggt
aagaatagatctggtcaggaccatgttcaagcaattaactctgtttcagaggtttctgtg
gttaaacagaataagagaaaggttaaacaatcgcctgttgaggataaacaagttgaactg
aatgctacaataatcacaaccgaacagatgatgtcaatcaaaaccgatgggatttcagtt
caaagcgaaccttggacaattcttgtgcataagaaaccccaaaaagggtggattccttat
aatcctagaacaatgaggcctccacaaccttcaaaagatacaaaatcattaaggcttatg
tcatggaatgtgaatggattaagaggattacttaaactagagggattctctgctttgcaa
cttgctcaaagggaaaactttgatgtattatgcttgcaagagactaaactgcaagaaaaa
gatgttgaatcaatcaaacattctctcttagaaggatatgagaatagcttttggacatgt
agtgtttctaaacttggttattctggtacagcaattatctcacggataaaaccactctca
gtcacatatggccttggtatagatgatcatgatgatgagggacggcttgtgacagctgag
tttgattcattctatttattaaacgcctatgtccctaactccggggatggcctgaaaaga
ttgtcatacaggatcatggattgggatccatctcttggcaggtacatgaaagagcttgaa
aagaagaaacctgttattttgacgggcgatctaaattgtgcccatgaagagatagacatt
tttaaccctgctggaaacaaaagaagtgctggctttacagatgaagaaaggcaatcgttt
gggaagaacttcttatctcagggatttgttgataccttcagagcacaacatcctggtgtt
gttggctatacatattggggttatcggcatggtgggagaaaaaataataaaggatggaga
ctagactactttcttgtctcgaaatctatagccaaccaagttcatgattcgtacattctt
cctgatattggaggcagtgatcattgtcctattggccttgtgctcaagcattag
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