Mangifera indica (mango): 123226098
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Entry
123226098 CDS
T07684
Name
(RefSeq) RNA-binding protein Y14-like
KO
K12876
RNA-binding protein 8A
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
minc03015
mRNA surveillance pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123226098
09122 Translation
03013 Nucleocytoplasmic transport
123226098
03015 mRNA surveillance pathway
123226098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123226098
03041 Spliceosome [BR:
minc03041
]
123226098
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123226098
Spliceosome [BR:
minc03041
]
Complex C
Other components
EJC/TREX
123226098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
123226098
NCBI-ProteinID:
XP_044506510
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All DBs
Position
9:11085852..11088497
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AA seq
198 aa
AA seq
DB search
MANTEVDALDFEDDDLMDEDGAVDLDASSSPRAAAPQPKLKSAITGAAPKKTKGRGFLEE
ADSERHIRLADRNFDSLGSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKN
LHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGTELLTQTVNVDWAFSNGPSTGPFKR
KNMRSARTHRSRSPRRRY
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggctaacacggaagtggacgcgttggactttgaagacgatgacttgatggacgaggac
ggcgccgtcgacctcgacgcttcctcttctcctcgtgctgccgcccctcagcccaagctc
aagtctgccatcaccggtgccgcccctaagaagaccaaaggccgcggattccttgaagaa
gccgattccgaacgtcatatccgcctcgctgatcgtaactttgactcccttggctcggat
ggtgggcccggcccccaacgatccattgaaggatggatcattttggtgactggggtacat
gaggaggcacaggaggatgatttgcaaaatgcttttggtgagtttggggagatcaaaaac
ttgcatttaaatcttgatcgccgtactggttttgtgaagggatatgcactgattgaatat
gagaatttcgaggaagctcaaaatgctataactgcaatgaatggaactgaacttctcacg
cagactgttaatgtcgactgggctttcagcaatggacctagcactggacccttcaaaaga
aagaatatgagatctgcacggacacatcgctcaaggagtcctaggaggagatattga
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