Mangifera indica (mango): 123226104
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Entry
123226104 CDS
T07684
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123226104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123226104
03110 Chaperones and folding catalysts [BR:
minc03110
]
123226104
03029 Mitochondrial biogenesis [BR:
minc03029
]
123226104
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
minc04147
]
123226104
Enzymes [BR:
minc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
123226104
Messenger RNA biogenesis [BR:
minc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
123226104
Chaperones and folding catalysts [BR:
minc03110
]
Heat shock proteins
HSP60 / Chaperonin
123226104
Mitochondrial biogenesis [BR:
minc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
123226104
Exosome [BR:
minc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
123226104
Exosomal proteins of other body fluids (saliva and urine)
123226104
Exosomal proteins of breast cancer cells
123226104
Exosomal proteins of colorectal cancer cells
123226104
Exosomal proteins of bladder cancer cells
123226104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
123226104
NCBI-ProteinID:
XP_044506520
LinkDB
All DBs
Position
9:13832744..13836133
Genome browser
AA seq
581 aa
AA seq
DB search
MASSNALSSAAIFCSPKRGSLVRRQQSNNQRVNYRRFSVRAAAKEIAFDQNSRTAMQAGI
DKLSDAVALTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT
NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKRGIDKTVQGLVEELEKKARPVKGR
EDIKAVASISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYIS
PQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALAT
LVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENTSVEQLGIAR
KVTIAKDSTTIIADAASKDELQARISQLKKELAETDSVYDTEKLAERIAKLSGGVAVVKV
GAATETELEDRKLRVEDAKNATFAAIEEGIIPGGGAALVHLSSYVPAIKDKLEDAEERLG
ADIVQKALVAPASLIAQNAGVEGEVVVEKLKISEWEIGYNALTDKYENLLEAGVIDPAKV
ARCALQNAASVAGMVLTTQAIVVEKRKPKTPAAAPPQGLMV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctaatgctctttcgtcagctgctattttctgctctcccaaacgggggagt
ctggtaagaagacagcagagtaataaccagagagtaaattatagaagattttctgtccga
gcagctgcaaaggagattgcctttgatcagaactccagaactgcaatgcaggccggcata
gataagctttcagatgctgttgctttgactctcggtcccagagggagaaatgttgttctg
gatgagtttgggagtcccaaggttgttaatgatggagtaacaatagcccgagcaattgag
ttagctgatcccatggaaaatgctggagctgctcttattagggaggttgcaagtaaaaca
aatgactctgcaggtgatgggacaacgactgcctcagtgcttgcacgagaaatcattaaa
cttgggcttttgagtgtcacctctggtgcaaatccagtgtcagtgaagagaggaattgat
aaaaccgtacaagggttggtagaagagcttgagaagaaggctaggcctgtaaaaggccgt
gaagatataaaagctgttgcttccatttctgctgggaacgatgaccttattgggacaatg
attgctgatgcaattgacaaggttgggcctgatggtgtgttgtccatcgaatcatcatcc
tcatttgagactaccgtggaagttgaggaaggaatggagattgacagaggttacatttcc
ccccagtttgtcaccaacccagagaaattaattgtagaatttgagaatgctagagtgttg
atcacagatcaaaagatttcagctataaaggatataatccccttgttagagaagactaca
caattaagagctcctttgctcataattgctgaggatgtcactggtgaggctctggctaca
cttgttgtgaacaagctacgtggtatccttaatgttgcagctattaaagctcctggtttt
ggtgagcgaagaaaagcccttcttcaagatattgccattttgactggagctgagtttcaa
gctagtgatttgggcttgctcattgagaacacctcagttgaacagctaggtatagctagg
aaggtgaccattgccaaggactcaaccaccattattgcagatgctgcatcaaaggatgag
ttacaagctagaatttctcagctgaagaaagagttggctgagacagattctgtatatgac
acagagaaactagctgagagaattgccaaattgtctggtggagttgctgttgttaaagtg
ggagctgcaacagaaaccgagctcgaggaccgtaagctccgcgttgaagatgctaagaat
gcaacttttgctgccatagaggaagggattatacctggtggtggtgctgcactagttcac
ctctcttcttatgttcctgcaattaaggataagcttgaggatgctgaggagcggctaggt
gcggacattgtgcagaaggctctggtggcacctgcatcactgatagcacagaatgccgga
gttgagggtgaggttgtcgtggagaagttgaaaatcagtgaatgggagattggctacaat
gccttgacagacaagtatgagaacctactggaagctggagtgattgatccagcaaaggtg
gcaagatgtgcattacagaatgcagcatcagtggcaggaatggtcctcaccacccaggct
attgttgtggaaaaacgaaagccaaaaactccagcagcagctcccccacaaggccttatg
gtatga
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