Mangifera indica (mango): 123226501
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Entry
123226501 CDS
T07684
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Pathway
minc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123226501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123226501
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123226501
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
U-box type E3
123226501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
Neurochondrin
HEAT_2
zf-RING_UBOX
zf-C3HC4_4
zf-Nse
MCAfunc
Arm_2
zf-C3HC4_2
KAP
HEAT_EZ
zf-C3HC4
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
123226501
NCBI-ProteinID:
XP_044506961
LinkDB
All DBs
Position
9:12794926..12799952
Genome browser
AA seq
663 aa
AA seq
DB search
MEEEQGMLVQSLIDTVNMIASFTDYSGTVKKQYSNLARRLKLLMPMFEEIKESKEAIPEE
TTTALVSLKEALASAKELLRFGSEGSKIYLVLERDEVMQKFYEVTAQLEQALSAISYEKL
DISVEVKEQVELVLSQFRRAKGRVDAPDVKLYEDLLSLYNKKNDAEMDTAVIRRLAEKLQ
LMGIADLTQESLALHEMVASTGGDPGERIEKMSMLLKKIKDFVQTDNPNLDAPSREKNLS
PSHFGKASSDRNHKAPIIPDEFRCPISLELMKDPVIVSTGQTYERSCIEKWLEARHSTCP
KTQQTLSSTALTPNYVLRSLIAQWCEANGIEPPKRPSSSQPSKTSSACSPAERTKIEILL
CKLTSGNPEEQRSAAGEVRLLAKRNADNRVAIAEAGVIPLLVGLLSTPDSRTQEHAVTAL
LNLSICEDNKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGGCGAI
PPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMHLLTEPEGGMVDEAL
AILAIIASHPEGKAAIGAAEAVPVLVEVIGNGSPRNKENAAAVLVHLCGGDLQYLAEARE
LGVRSRLVDLAQNGTDRGKRKAVQLLERLSRFIELPKHVHVQTENQSQTQKPQPSSAANS
VDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagcaaggaatgcttgtacagagtctgatcgatacagttaacatgatagcg
tcattcacagattacagtggcacggtcaagaaacagtactctaatttagctagaagattg
aagttgttgatgccaatgtttgaggaaattaaagaaagcaaagaagcgattcccgaagaa
actactacagctttagtttcgttaaaggaggctttagcttcagctaaagagttgctcaga
tttggcagcgaaggcagcaagatttacctggtcctagagagggatgaagttatgcaaaaa
ttctatgaagtgacagctcagttggaacaagctttaagtgcaatatcctatgagaagctt
gatatatcagttgaagtcaaggaacaggttgagcttgttctttctcagttcagaagagcc
aaaggaagggttgatgcacccgatgttaagctgtacgaggaccttttgtctctttacaac
aagaaaaatgatgcagagatggatacagctgtcataaggagattggctgaaaagctgcaa
ttgatgggaatagctgacttgacacaagaatcactggctttacatgagatggttgctagc
actggtggagatcctggggagagaattgagaagatgtcaatgctattgaagaaaattaaa
gattttgtgcaaacagataaccctaacttggatgctccttcaagggaaaagaatctttcc
ccaagccattttgggaaagcatctagtgataggaaccataaggccccaattataccagat
gagttccgttgtccaatatccctggagttaatgaaagatcctgtcattgtttcaacagga
cagacctatgagcgatcctgcattgaaaagtggctggaagcgaggcacagtacatgtccg
aagacacagcagactctgtctagtactgcactcacacccaattatgtactccgtagcctc
atagctcaatggtgcgaggcaaatggcattgaaccaccaaaacgacccagcagttcacaa
cccagtaaaacctcatctgcctgttcacctgctgagcgtaccaagattgagattctcctt
tgcaagctcacatctggtaaccctgaggagcagcgatctgctgctggtgaagtccgtctt
cttgccaagcgcaatgcagataatcgtgtcgccattgctgaagctggtgtgatccctctc
cttgtaggactgctttccacacctgattctcgcacccaggaacacgctgtcacagctctt
cttaacctttccatatgtgaggataacaaagggagtattgtctcctctggggcagtccct
ggtatagttcatgtattaaaaaaagggagcatggaagcacgagaaaatgctgcagccacc
ctttttagcctttcagttattgatgaaaacaaagttactattggtggctgtggagccatc
ccgccactagtgactctgctaagtgaaggtacccaaagggggaagaaggatgctgcaact
gctctcttcaatttgtgcatttaccaaggaaacaaaggaaaggctgtgagggctggagtt
gttcctaccctaatgcatttgctgacagaacctgaaggtggcatggtggatgaagcactg
gccatcctagctataattgctagccatcctgaagggaaagcagctattggggctgctgaa
gcagtgccagttctggtggaggttattgggaatggttctcctagaaacaaagagaatgca
gctgcagttttggtacacctttgtggtggagacctacaatatctggcagaggctagggaa
cttggggtgaggagtcgtctggtggatttggcacagaatggcacagacaggggcaagcga
aaggctgtacaattgcttgagcggttgagtagatttattgagctgccaaagcatgttcat
gtgcaaacagaaaatcagtctcagacacaaaagccacagccatcatcagcggcaaacagt
gttgatagctga
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