Mangifera indica (mango): 123226840
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Entry
123226840 CDS
T07684
Name
(RefSeq) autophagy-related protein 18c-like
KO
K22991
WD repeat-containing protein 45
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123226840
Membrane trafficking [BR:
minc04131
]
Autophagy
Other autophagy associated proteins
Others
123226840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_2nd
WDR55
CPSF_A
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
123226840
NCBI-ProteinID:
XP_044507293
LinkDB
All DBs
Position
10:5743258..5746225
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AA seq
411 aa
AA seq
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MSSTISSSRGILQHTMLGPFESPNSGPSASFHPPHPDFNDVNEVELLSASWNQDYGCFAA
GTSSGFRIFNCEPFKETLRRDLKSGGFKIVEMLFRSNILALVGSGGNSLYPPSKVILWDD
HQSRCIGEFAFRSDVRAVKLRRDRFVVIVEHKIYVYSFIDLKLLHQIETLANPRGLCSLS
HHSSTSVLACPGLQRGQVRVEHFGLNMVKLINAHESNIACITLTVDGLLLATASIKGTLI
RIFNTVDGTRLQEVRRGVDRAEIYNITLSPNVQWLAVSSDKGTVHIFSLRVRVVGEDSSS
HRTPAQSPTLLNQTSSTSIDALISPSSGANHSSSLSFMRGVLPKYFSSERSFAQFHLPED
TKFIAAFGSQNTVIIVGMDGSFYRCSFDPVNGGQMLQQEYVLFLKTDSRPR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaccatttcgtcatcccgaggaatccttcaacatacaatgcttggaccgttt
gaatcccccaattctggcccttctgcttcttttcacccgccccaccctgactttaatgat
gttaatgaagtagagttgctatctgcctcctggaatcaggactacggttgctttgctgct
ggaacaagttctggctttcgtatttttaactgtgagccttttaaggaaacactcagacgc
gatttgaaaagtgggggatttaaaattgttgagatgctgtttcgctccaatattcttgca
cttgttggttctgggggtaattccctgtatccgcccagtaaagttatcctttgggatgat
catcagagcaggtgcattggtgaatttgcatttagatctgatgtgcgtgcagtgaaattg
agacgggatcgcttcgttgttattgttgagcataagatatatgtttacagttttatagat
ctgaagcttctgcatcagattgagactctagcaaatccaaggggcctttgttctctttct
caccattcaagtacatcagtgttggcttgcccggggctccaacgagggcaggttcgagtt
gagcactttgggctcaatatggtaaaattaattaatgctcatgaatcaaatattgcgtgc
atcaccttgacagtagatggtctgcttcttgctactgctagtataaaaggtactttgata
aggatattcaacacagtggatggtactcgcttgcaagaggttcgaagaggtgtggacaga
gcagagatttacaatattactctttctcctaatgtccaatggctagctgtgtcaagtgac
aaaggtactgttcatatattcagtctcagagttcgagtggttggggaggactcttcctct
catcgtactcctgctcaaagtccaacacttttaaaccaaacttcttcaacatcaattgat
gctcttatttctccaagctctggtgccaaccatagttcatcattgtcatttatgagggga
gtcttaccaaaatattttagctcagagcggtcatttgctcaattccacttaccagaagac
accaaattcattgcagcatttggatctcaaaatactgtgattattgttggcatggatgga
agtttctataggtgcagttttgatccagtgaacggtggtcagatgctgcaacaggaatat
gtgctctttctgaaaacagacagtaggcctagatag
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