Mangifera indica (mango): 123226883
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Entry
123226883 CDS
T07684
Name
(RefSeq) nijmegen breakage syndrome 1 protein isoform X1
KO
K10867
nibrin
Organism
minc
Mangifera indica (mango)
Pathway
minc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123226883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
minc03032
]
123226883
03400 DNA repair and recombination proteins [BR:
minc03400
]
123226883
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123226883
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123226883
BRCA1-C complex
123226883
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FHA
Nbs1_C
BRCT
Yop-YscD_cpl
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
123226883
NCBI-ProteinID:
XP_044507369
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Position
1:4602066..4616486
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AA seq
577 aa
AA seq
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MVWGLFPIDPLSGEDKYYIFSGGSYKVGRKGCDVIINKDKGVSRIHAEIFVDEMISLNPL
QRDSSNINSKVRIRDCSKYGTFINKTGESKEKLHEFPGKEKTLKDGDLISFGTGSATYRF
SYAPLLLFVYRSDIMQVNASIQEKVSSIGACLTSNFCMECTHVLVHSQMPVTEDLLDAIL
AKKPLVTDSWLESVAEKSICTEFPSCNFSVMTLMVEGVPIELANSENRKNCLEAYTFLLE
STDKYKYGYRLPSLLEVCGSKTLCIERFCSTSQDLEHGDHHRVVFVIPRKSKDESSCFHK
LSSLPRVDEMDLIYAVLSGHLDPSILTSPSVIISSSCSTDETVVADSDVEAETSSLVNAT
STATTREAPKYPSKDEISVNYANNSISGSMEKADVVLTEEAPKYLTKGEISISHASPCMT
GSRKKADEADAPGVNKEAPKYLKKEEISINHANNSMTRCREKADESECEHSVVIYNQDLV
VRDLNLSATFSSTANNGVINFKCFRKINTQSGNSFSRLIPFSKYPYKESNYETEEMVESV
KEEKKRKQLEAIAEDLFNNERGRKRGVAGTLHGLLTR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggtatggggtctctttccaatcgatcctctttcaggcgaagataaatactacattttc
agcggggggagctacaaagtgggtcgcaaaggttgtgatgtaattatcaataaagacaaa
ggagtttctcgaatccatgcggagatatttgttgatgaaatgatttcattgaatcctctt
caaagagattcttctaacataaactccaaggttcggattcgagattgctcaaagtatgga
acatttattaacaagactggtgaatcaaaggaaaaacttcatgaatttccgggtaaagaa
aaaacactcaaagatggtgacttaatttcatttggaactggtagtgcaacctacaggttt
tcttatgctcctctcttactttttgtctaccgctctgacattatgcaagtaaatgcttcc
attcaagaaaaagtttcatcaataggtgcttgtcttacaagtaatttctgtatggagtgc
acacatgttcttgttcatagtcagatgcctgtaacagaagatctccttgatgctattttg
gctaaaaaacctctggttactgatagctggcttgagtctgttgcagagaaaagcatttgc
actgaatttcctagctgcaatttttctgttatgacattgatggtagagggagtaccaata
gaacttgcaaactcggaaaatcgtaagaactgtttggaagcatatacttttctgttggag
tcaacagacaagtataaatatgggtatcgattaccgtcactgttggaagtgtgtggttca
aagacactttgcattgaaagattttgttcaaccagccaagacttggagcatggagaccat
catcgtgtggtatttgtcatcccaaggaaatccaaagatgaatctagttgcttccataaa
ctcagttcactacccagagtggatgaaatggatttgatatatgctgttttatctggacat
ctggatccatctattttgacatcaccatctgtgattatttcatcttcatgctccacggat
gagacagtggttgcagactctgatgttgaagcagagacatcctcattggttaatgcaaca
tctactgccactactagggaagcccccaaatatccaagtaaagatgaaatatctgtcaat
tatgcaaacaatagtatatcaggaagcatggagaaggctgatgtggtccttaccgaggaa
gcccccaaatatctgacaaaaggggaaatatctatcagccatgcgagcccttgtatgaca
ggaagcagaaagaaggcagatgaggctgatgctccaggcgttaataaagaagcccccaaa
tatctgaaaaaagaggaaatatcaatcaatcatgcaaacaatagtatgacacgatgcaga
gagaaagctgatgagtcagaatgtgaacattcggttgttatttacaaccaagatttagtt
gtccgagatttgaacttaagtgcaacttttagctctacagcaaataatggagttataaat
ttcaaatgcttcagaaagataaatactcagtcaggaaatagcttcagccgtcttattcca
ttttcaaagtacccgtataaagaatcaaactatgaaactgaggaaatggtcgagtctgtt
aaagaagagaagaagagaaagcaactggaggctattgcagaagacttgtttaacaatgaa
aggggaagaaagcgtggagtagctggtacccttcatggacttcttactcgatga
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