Mangifera indica (mango): 123227044
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Entry
123227044 CDS
T07684
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
minc
Mangifera indica (mango)
Pathway
minc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123227044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
minc03400
]
123227044
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
123227044
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWI2_SNF2
AAA_16
Motif
Other DBs
NCBI-GeneID:
123227044
NCBI-ProteinID:
XP_044507593
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All DBs
Position
10:3094916..3098885
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AA seq
903 aa
AA seq
DB search
MESGMMVLPLTYASPNESCSKGHKRIKLSSDAKTYGCTTSSVSMKDETEEKKAEVSQNII
DYSDPFAISNLLDNLDSGKFGSVTKDIKDLIDRKFQIWGPLCANNPLLSNIFLNAESPSK
QATKLAIQNPFQKVIDLEDDTAALTHHPSVVVLSDDEDEEEKRPSYPFHEVVLPRPEPPA
GHFFTKDMMIRGYFENTFKLQGYPQNRIKREEEVSLVGEIAIEKDQGVYVGVEEDNDDRK
KTEDDGLGDIWQEMSMALECSKDVVEDNTGNEHMEEDGEDCDHSFVLKDDLGYVCRICGV
IDRGIETIIEVQFNKAKRSTRTYMYDPGNGKGRDSSYIDGVKLSENDLMVTDIAAHPRHM
KQMKPHQIEGFNFLRSNLVTDHPGGCILAHAPGSGKTFMIISFMQSFLAKYPQARPLVVL
PKGILATWKKEFQTWQIEDIPLFDFYTVKADSRAQQLEVLKKWVEQKSILFLGYKQFSAI
VCDSETSKAAATCQEILLKQPSILILDEGHTPRNENTDVLQSLAKVKTPRKVVLSGTLYQ
NHVKEVFNILNLVRPKFLKLDSSRVVVKRIMSRVHIPGLRKQFKAGAHAAFYDLVEHCLL
KDEDFKRKVTVIQDLREMTSKVLHYYKGDFLDELPGLVDFTVVLNLSYRQKSEVSKLKML
RGKGGKFKLSAVGSSVLLHPKLKSLPENSVPADDTMDEVLEKLDVKDGVKAKFFLNLLNL
CDAAGERLLVFGQYLQPLKFLERLVVKMKGWSLGREIFVISGESTAEQREWSMDRFNNSP
HSRIFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTRKVYAYRLVCA
DTHEEKDHTACFRKELISRMWFEWNEYCGYRNFEIETLDVNDCGDLFLETPTLREDVKDL
YRR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggagtctggaatgatggttcttccattaacttacgcttctccaaacgagtcgtgttca
aagggacataaaagaattaaattatcaagtgatgcaaaaacttatggttgtactacttcc
tccgtgtctatgaaagacgaaacagaagagaagaaggcagaggtttcacagaatataatt
gattattctgatccatttgccatctcaaatttgcttgataacttagattctggtaaattt
gggagtgtaacaaaggacataaaggacctcatagatcggaaatttcaaatatggggtcct
ctttgtgccaacaatcctttactttcaaatatatttttgaatgctgagagcccgagtaag
caggccacaaagttggctattcaaaatccttttcaaaaagtcatcgatttggaagatgac
acagcggctttaactcatcatccatcagttgtagttctttcagatgatgaagatgaggaa
gagaagaggccttcttatccttttcacgaggttgtcttgccacggcctgagcctcctgct
ggacattttttcacaaaggacatgatgattaggggctattttgagaacacatttaagctt
cagggctacccacagaacagaattaaaagggaagaagaagtaagtttagttggtgaaatt
gctatcgagaaagatcagggtgtttatgttggtgtggaagaggataatgatgatagaaag
aagactgaagatgatggtctgggggatatttggcaggagatgtcaatggcgttagaatgt
tccaaggatgtggttgaagataatacgggcaatgagcacatggaagaagatggtgaggac
tgtgatcattcatttgtcttgaaggatgatctgggctatgtttgtcgtatttgtggagtg
attgaccgaggaattgaaaccataattgaggtccagtttaataaggccaaaaggagcacc
agaacatacatgtatgatcccggaaatggcaaaggtagagattccagctacatagatgga
gttaagttgtctgaaaatgacttgatggtgactgacattgctgctcatccaagacatatg
aaacaaatgaaacctcatcaaattgaaggatttaattttcttcgaagtaatctggtgact
gatcatcctggtggctgcattttggctcatgcacctggatctggaaagacatttatgata
atcagtttcatgcagagtttcttagctaagtatccacaggccagaccactggtggtgctt
cctaaaggaatattggcaacatggaagaaagagtttcagacttggcagatagaagacatt
ccactttttgacttctacactgtgaaagctgacagtagagctcagcaattagaggtgttg
aaaaagtgggtggagcagaagagtattcttttcttagggtacaaacagttttctgcaatt
gtttgcgactctgaaaccagtaaggcagcagccacttgtcaagagatactgctcaagcaa
ccgtcaattctgattttggatgaagggcacactccaaggaatgagaacactgacgtattg
caatcccttgctaaagtaaagacacctcgaaaagttgttctttctggaaccttgtaccag
aatcacgtgaaagaagtgtttaatatattgaatcttgttcggccaaaatttctgaaactg
gattcctcacgggttgttgttaagcgcataatgagtagagtacatattccaggtttgagg
aagcagttcaaagccggtgcacatgctgctttctatgatttggtggagcattgtcttctg
aaggacgaagatttcaagaggaaagtcactgtcatacaagatcttcgtgagatgaccagc
aaggtcctacattattataagggagatttcttggatgagcttcctggacttgttgatttc
acagtggtactgaatctgagttacagacagaagagtgaagtttcaaagctaaagatgctg
cgtggtaagggtggcaagttcaagctttctgctgtcggaagttctgttcttctgcatcca
aagttgaagtctcttcctgagaatagtgtcccagcagatgatacaatggatgaggttttg
gaaaaactagatgtgaaagatggagtcaaagctaaattttttcttaatctgttaaacttg
tgtgatgctgctggtgagaggttacttgtctttggtcagtaccttcaacccttgaaattt
ttagagagattagtagtgaaaatgaagggatggagtctaggtcgagaaatctttgtgatc
tcaggtgaatcaactgctgagcagcgagagtggtcaatggatcggttcaataattctcct
cattcaagaattttctttggttcaattaaggcttgtggagagggaatctcactggttggt
gcatcccgcattattattcttgatgttcatcttaatccatctgtgactcgccaagcaatt
ggccgtgcattccgaccaggccaaacaaggaaagtgtatgcatatagattagtttgtgcc
gatacccatgaagagaaagatcacactgcttgcttcaggaaggaactgatctcaagaatg
tggttcgagtggaatgaatattgtggttacaggaattttgagattgagactctggatgtg
aatgattgtggagatctcttcttggaaactccaactttgagggaagacgttaaagatctg
tacagaaggtag
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