Mangifera indica (mango): 123227045
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Entry
123227045 CDS
T07684
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
minc
Mangifera indica (mango)
Pathway
minc04142
Lysosome
minc04144
Endocytosis
minc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123227045
04142 Lysosome
123227045
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
123227045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123227045
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
minc04147
]
123227045
Membrane trafficking [BR:
minc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
123227045
Exosome [BR:
minc04147
]
Exosomal proteins
Proteins found in most exosomes
123227045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
123227045
NCBI-ProteinID:
XP_044507594
LinkDB
All DBs
Position
10:5163899..5176156
Genome browser
AA seq
1706 aa
AA seq
DB search
MAAANAPISMKEVLTLPSIGINPQHITFTNVTMESDKYICVRETTPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNTRILALKAQLPGTTQDHLQIFNIELKAKIKSHQMPEQVVFWKWI
SPKMLGIVTQTAVYHWSMEGDSEPVKMFDRTANLANNQIINYKCDPSEKWLVLIGITPGS
AERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFATKSLNAGQVTS
KLHVIELGAQPGRPAFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAEASSVGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFSQTKYKEAAELAAESPQGLLRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYMRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDADLWEKVLNPENSFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDSTQFLEVIRAAEDVDVYHDLVRYLLMVRQKVKEPKVDSELIYAYAKIDRLGDI
EEFILMPNVANLQSVGDRLYDDTLYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGYFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWEELTYLYI
LYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLLLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYERLRESIDM
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRADVALELAWINNMVDFAFPYLLQFIREY
TGKVDELVKDKIEQQNEVKTKEKEEKDVLAQQNMYAQLLPLALPAPPMPGMGGSSSMGGG
FAPPPPMGAMGMPPMPPFGMPPMGSY
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagccaacgctccgatctccatgaaggaggtcttaactttgcccagtattggg
atcaatccacaacatattaccttcacgaatgtgactatggaatcggacaagtatatttgt
gttcgggaaacgacgccacagaacagtgttgtgatcatcgatatgaatatgccaatgcag
ccgttgagacggccaatcacagctgactctgcacttatgaatcctaacactagaatcctt
gctctgaaagctcaattaccggggaccacacaagatcacttacaaatatttaacattgag
ttgaaagcaaaaattaaatcacaccagatgccagagcaagttgtcttttggaagtggatt
agccccaagatgttgggtatagtcactcagaccgcagtatatcattggtccatggaaggt
gattctgagccagttaagatgtttgatagaacagctaacttggccaacaatcagattata
aactacaaatgtgacccttctgagaagtggttggttttgattggaattactcctggctca
gctgagaggccacaattggttaaagggaacatgcaacttttctctgtggatcagcagcgt
agccaagcacttgaagcacatgctgcatcatttgcccaatttaaggttccagggaatgag
aatccttctattcttatttcctttgccaccaagtctctcaatgctggtcaagtcacatca
aagctgcatgttattgagcttggtgcccagccaggaaggccagcttttacaaagaaacag
gcagatcttttctttccccctgattttgctgatgactttccagtggcaatgcagatatcc
cacaagtacagtttgatatacgttatcaccaagcttggactactgtttgtatatgatttg
gagactgctgctgctgtatacagaaatagaattagtcctgatccaatatttctgacagcc
gaagcttcatctgtgggtggtttttatgccatcaataggcgaggccaggtgttgcttgct
actgtgaatgaagcaacaatagtaccttttgttagtggccaattaaataatttggaactc
gctgtcaatctcgctaaaaggggaaaccttcctggtgcggagaatctggttgtgcagcga
ttccaagagttgttttcacaaacaaagtataaagaggctgctgaacttgctgcagagtct
cctcagggactactccgcacacctgacacagtggccaaatttcagagtgttcctgtgcaa
gctggacagacaccacctttgttgcagtactttgggacacttttaacaagaggaaagctc
aatgcattcgagtcattggaattatctcgtcttgttgtgaaccagaacaaaaagaatctt
ctggagaactggttggctgaggacaagttggagtgcagtgaggaacttggagaccttgtg
aagactgtggataatgatcttgcattgaaaatatatataaaagctagagcaaccccaaaa
gttgttgctgcttttgcagaacgtagagagtttgacaaaattctcatttactcgaagcag
gttgggtatacgcctgactatttgtttcttctccaaacaattctccgtacagatccccag
ggagctgttaattttgccttaatgatgtctcaaatggaggggggctgtccagttgattac
aataccattacagatctttttctccagaggaacctgatccgtgaagcgacagccttctta
ttggacgttttgaagccaaatcttcctgaacatggttatcttcaaactaaggtcttggaa
atcaatcttgtaacttttccaaatgtagctgatgctattttggccaatggaatgttcagc
cactatgatcgtcctcgaatagcccaactttgtgaaaaagctggtctctatatgcgagct
ttacaacattacaccgagttaccagatattaagcgtgtcattgtcaacactcatgcaatt
gagccacagtcacttgttgaattttttggcactctttcacgggaatgggctttggagtgc
atgaaggaccttttacttgttaatctaagaggcaacctacagataattgtgcagactgcc
aaagaatactgtgagcaattgggtgttgatgcatgcataaaactttttgagcagtttaag
tcgtatgaggggctttacttcttcctggggtcatatttgagttcaagtgaggatcctgat
atacacttcaagtacatagaggcagctgctaaaactggacaaataaaggaggtggagcga
gttacaagagaatcaaatttctatgatgctgaaaagacaaagaactttttgatggaagca
aagcttcctgatgccaggccactgattaatgtttgtgaccgttttggtttcgttccagat
ttgacacactacctgtacacaaacaacatgcttcgctacattgaaggttatgttcagaag
gtaaacccagggaatgctccattagttgtggggcagctattggatgatgaatgcccagaa
gattttattaaaggcctcattctttctgtccgttctttgcttccagttgagccccttgtt
gaagaatgtgagaagaggaatcgacttcgtttactcactcagttcttggagcatcttgta
agtgaaggaagccaagatgttcatgtacacaatgccctgggtaaaataatcattgacagc
aataacaatccggagcacttcctgactactaacccatactatgactcaagagtggtgggc
aagtattgtgagaagcgggatccaacactggcagttgttgcttaccgcagaggacaatgt
gatgatgagctgatcaatgtcactaataagaactctttatttaaattgcaagccagatat
gtggttgaaaggatggatgctgatctttgggagaaggttcttaatcctgagaattctttc
agaagacagctcattgatcaagttgtatctacagcattgccagagagcaagagcccagaa
caagtttcagctgctgttaaagctttcatgactgctgatctgccccatgaactaattgaa
cttttggagaagattgtgctgcaaaattctgctttcagtggaaacttcaacttgcaaaac
ctgcttatcttgacagctattaaggctgatccttctagagtcatggattatattaatcga
ttagataattttgatggacctgcagtaggggaagtggctgttgaagcccaattatatgaa
gaagcatttgcgattttcaagaagttcaatttgaatgtacaggctgttaatgtcttgttg
gacaatattcgaagcattgaacgggccgtggagtttgctttccgtgtcgaagaggatgca
gtttggagccaggtggcaaaggctcaactcagggaggggctggtgagtgatgcaattgag
tcatttattcgtgctgatgattctactcagttccttgaagttattcgtgctgctgaggat
gtagatgtgtaccatgacttggtcagataccttctgatggttaggcagaaggtaaaagag
cccaaggtggatagtgagctcatttatgcatatgcaaagattgataggctgggtgatatt
gaagaatttattctcatgccaaatgttgctaatcttcaaagtgtgggtgatcgcttgtat
gacgacaccctctatgaggctgcaaaaataatatatgcatttatatctaactgggcgaag
ttggccgttactcttgtgaagctgaagcaattccagggtgctgttgatgcagcacgaaaa
gctaacagtgcaaagacatggaaggaagtttgttttgcttgtgttgatgcagaggagttc
cgtttagctcagatttgtgggcttaacattattgtacaggttgatgacttggaagaagtc
agtgaatattaccagaacagaggatatttcaatgaattaatctctcttatggagagtggt
ttaggtttggaacgtgctcatatgggaatatttactgagttgggagttctttatgctaga
tatcgttatgaaaagcttatggagcacatcaaattgttttccacccgtctcaatattccc
aagcttatcagagcttgtgatgaacaacagcattgggaagaacttacctatttgtacata
ctgtatgatgagtttgataatgctgctacgacaatcatgaaccattcacctgaagcttgg
gatcacatgcaattcaaagatgtagctgtcaaagttgctaatgtggagttatattataag
gctgttcacttttacttgcaagagcatccagatcttatcaatgacctgctcaatgtgctc
gccctgcgtgtggaccatacacgcgttgttgatattatgcgaaaggctggtcatcttctc
cttgtgaagccatatatggttgctgttcagagcaacaatgtgtctgctgtgaatgaggct
ttaaatgagatttatgttgaggaggaggactacgagagattgcgtgaatcaattgatatg
catgataactttgatcagatagggcttgctcagaagattgagaaacatgagcttttggaa
atgagacgtgttgctgcttatatttacaagaaagcaggcagatggaagcaatcgattgca
ctttcgaagaaagacaacctttacaaagatgcaatggagacagcttcacaatctggtgac
cgtgaactggctgaggagttacttgtttatttcattgaacagggaaagaaggaatgcttt
gcatcgtgcctctttgtttgttatgatttaattcgtgcagatgttgccctggagctggcc
tggataaacaacatggttgactttgccttcccatatctgttgcagttcatccgtgaatac
acaggcaaagttgatgaacttgtgaaggacaaaattgagcagcaaaatgaagtcaagact
aaagaaaaggaagaaaaggacgtacttgcacagcagaatatgtacgctcagttgctgccc
cttgcgttacctgcaccaccaatgcccggtatgggaggatcatcttcaatgggagggggt
tttgcaccaccaccacccatgggtgccatgggaatgcctccaatgccacctttcggcatg
cctccaatgggtagctactaa
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