Mangifera indica (mango): 123227081
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Entry
123227081 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
minc
Mangifera indica (mango)
Pathway
minc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123227081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123227081
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123227081
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
HECT type E3
123227081
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
123227081
NCBI-ProteinID:
XP_044507648
LinkDB
All DBs
Position
10:complement(2195025..2205232)
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AA seq
1889 aa
AA seq
DB search
METRSRKRAEASSTAPSISSSSSGPTTRSLANKRLRVAPTTSTTTTAPASSSSATTRSRR
SRALSMDPTTESSGSRHTRRSKISSSNADISAEKGKEKEHNNNNNNNSNNNISDLTNTGR
ALGLNMDSGIDDDENDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSPVMGSASS
SHQSGRLKKILSGLRADGGEGKQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNH
ESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVTCFVARLLTIEYMDLAEQSLQALKKI
SQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTN
LLQYHDSKVLEHASVCLTRIAEAFASLPDKLDELCNHGLVTQAASLISTSNAGGGQASLS
TPTYTGLIRLLSTCAGGSPLCAKTLLLLGISGILKDILSGSGVSATTSVPPALSRPSEQI
FEIVNLANELLPMLPPGTITLPASSIIFLKGPVVRKSPASSSVKQDDANVSAPEVSAHEK
LLNDQPELLQQFGLDLLPVLLQIYGSSVNSPVRHKCLAVIGKLMFFSSAEMIQSLLSVTN
ISSFLAGVLAWKDPHVLVPALQIAEILMEKLPGTFSKMFVREGVVHAVDQLILVGNPNTV
PAQSSPGDKDNDSGSGTSARSRRYRRRTGNSNPEGNYEESKNPVSLNVGSPPSSVEIPMV
SSNLRTTVSASAKAFRDKYFPSDPGATEAGITDHLLHLKNLCLKLNAGVDDQRTKAKGKS
KASGSRMADISDSKEEYLIGVISEMLTELSKGDGVSTFEFIGSGVIAALLNYFSCGCFSK
ERISEANLHKLRQQALKRFKLFLSVSLPSSVDAASVAPLTILVQKLQNALSSLERFPVVL
SHSSRSSGGSARLSSGLSALSQPFKLRLCRAQGEKSLRDYSSNVVLIDPLASLAAVEEFL
GPRVQRGESVQKPTASVGNSDSGTTPTGAGASSTSTSTPASAARHRLSSRSRLSVNIGDA
TKKEPSQEKGSSSSKGKGKAVLKSAQEESRGPQTRNAARRKAALDKDAQTKQVNEETSSE
DEELDISPVDIDDALVIEDDDISDDDDVDHEDVLKDDSLPFCIPDKVHDVKLGDSAEDSI
FASAASESQTNPASGSSSKAATVRGSDSADFRTSNSYGSRGAMSFAAAAMAGLGSANGRG
VRGGRDRYGRPLYGSSGEPPKLIFTAGGKQLNRHLTIYQAVQRMLVLDEDDDERYGGSDY
ISSDGSRLWSDIYTITYHKADGQADRMSIGGSTSPSPSKSTKCDSASNSNSDAQSHRTSL
LDSILQGELPCDLEKSNPTYSILALLRVIEGMNQLAPRLRAQMVSDSYAEGKILSLDEQS
ATGARVPSEDFVNSKLTPKLARQIQDALALCSGSLPTWCYQLTKACPFLFPFETRRQYFY
STAFGLSRALYRLQQQQGADGHGLINEREVRVGRLDRQKVRVSRNRILDSAAKVMEMYSX
QKAVLEVEYFGEVGTGLGPTLEFYTLLSRDLQKVGLGMWRSNSSSEKSSMEIDGGDVVGD
LVLAPLGLFPRPWPPNADTSEGSQFSKVIEYFRLFGRVMAKALQDGRLLDLPLSTAFYKL
VLGQDLDLHDILSFDSEFGKILQELHVIVCRKQYLQSASCDNRDAISDLRFRGAPIDDLC
LDFTVPGYPDYILKPGDENVDINNLEEYISLVVDSTVKTGIMRQMEAFRAGFNQVFDISS
LQIFTPHELDLLLCGRRELWKAETLAEHIKFDHGYTAKSPAIVNLLEIMGEFTPDQQRAF
CQFVTGAPRLPPGGLAVLNPKLTIVRKHSSTASNTATNGTAASETADEDLPSVMTCANYL
KLPPYSTKEIMYKKLLYAINEGQGSFDLS
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccgaaagcgggcggaggcctcctcaactgccccttcgatttcgtca
tcttcgtctgggcccaccactcgttctcttgccaataaacgactacgtgtagctcccact
acctcgacaacaacaaccgcccctgcatcttcctcttccgccaccacgcgctcacgtcgc
tcacgcgctctctccatggaccccaccactgaatcctccggttctcgccacactcgccgc
tccaaaatctcctcatccaacgccgacatttccgcagagaaaggtaaagaaaaagaacac
aataataacaacaacaataacagcaataataatatttcggatttgacgaacacgggtcgg
gcactggggttgaatatggattcgggtatagatgacgatgagaatgacagcgagggtgga
gttggaattttgcaccagaatctgacctcagctagcagtgcgttgcaaggacttttgagg
aagctgggagctggattagatgatcttttaccctccccagtcatggggtcggcgtcgtca
tcacatcagagcgggagattgaagaagattttatctgggctgagggcagacggcggggag
gggaagcaagtggaggcgttgacgcagctttgtgagatgttgtctattggaacggaggag
agtttgagtaccttctcagtggattcatttgtgccggtgctggttggattgctgaatcat
gagagtaatcccgatattatgttgcttgcggccagggcactcacgcatttgtgtgatgta
ttgccgtcatcttgtgctgctgtcgtgcattatggggcggttacctgtttcgtggctcga
ttgctgacaattgagtatatggacttggctgaacagtctcttcaagctttaaagaagata
tcgcaggagcacccaactgcctgtttgagagcaggtgctctaatggcagttctctcatat
ctggatttcttctccacaggagttcagcgggtggcattgtccactgctgcaaatatgtgc
aagaaactcccttctgatgctgctgactttgtgatggaagctgttcccttgttgacaaac
cttcttcaataccatgattcgaaggtgttggaacatgcttctgtttgtttgacacggatt
gccgaagcatttgcatcattgccagacaagttagatgaactatgtaatcatgggctggtt
acacaagctgcctctctcatttcaaccagtaatgctggtggtgggcaggcatctcttagc
acaccaacctacacgggtttaatccgattgctatccacttgtgctggtggatcccctctt
tgtgccaaaactttgcttctccttgggattagtggaattttgaaagatatactatctggg
tctggtgtttctgctactacatctgttccaccagctttgagtagaccgtcagagcagatc
tttgagatagtcaacctcgcaaatgagctgctccccatgctgcctccaggaactattacc
cttccagccagctccattatatttttgaaaggtcctgtggtgaggaagtcacctgccagt
agttctgtgaaacaggatgatgccaatgtaagtgctcctgaggtttctgctcatgagaaa
ttattaaatgatcagcctgaacttctgcagcagtttggattggatcttcttcctgttcta
ctacagatctatggttctagtgtcaacagtccagttcgccacaaatgtcttgctgttatt
gggaaattgatgttcttcagtagtgcagagatgattcagtctctgttgagtgtgacaaat
atatcaagctttttagctggtgttttagcatggaaagatccgcatgtcttggttcctgct
cttcaaattgctgagattctcatggaaaagcttcctggtacattctccaagatgtttgtc
agagaaggtgtggttcatgctgtagatcaacttattttagttggtaatccaaatactgtc
cctgcccaatcatctcctggtgacaaggacaatgactctggatctggtacatcagcacga
tctaggcgttatagacgacgcactggtaactcaaatcctgaaggaaattatgaagaatca
aagaatcctgtttcactaaatgttggctcacctccaagttcagtagaaattccaatggtt
agttctaatctccgaactacagtcagtgcaagtgctaaagcatttagggataagtacttt
ccttcagatcctggggcaactgaagctggaattacagatcatcttttacatctgaagaat
ctttgtttgaagttgaatgctggtgttgatgaccaaaggactaaagcaaagggaaaatct
aaagcatctgggtctcgtatggctgacatttctgatagtaaggaagagtatttgattggg
gtgatatctgaaatgttaactgaactaagcaaaggggatggtgtatccacttttgagttt
attggcagtggtgttatcgcagctttgctaaattatttttcttgtggttgtttctcaaag
gaaagaatttcagaagccaatttgcacaagcttcgccaacaagctcttaaaagatttaag
ttatttctttccgtttcacttccatctagcgtggatgcagcgagcgtggctcctttgact
atcttagttcagaagcttcaaaatgctttgtcctcactagagcgttttcctgtcgtgctg
agccattcatctaggtcatctggtggaagtgctcgtctctcttctgggctgagtgcatta
tctcaaccctttaagttgcgcctctgtcgagctcaaggggaaaaatctctccgtgattat
tcttctaatgttgtgctgattgatccgttagcaagtttagcagctgttgaagaatttctt
gggcctcgagttcagcgaggtgaatctgttcaaaagcctacagcatctgtggggaattca
gactctgggaccacacctactggagctggtgcttcatctacttctacgtcaactcctgca
tctgcagctcgtcatcgtctttcttcaagatccagattatctgttaatataggagatgcc
acaaaaaaagaaccttcccaagagaaggggtcaagctcatctaaggggaagggtaaagct
gttttgaagtctgctcaggaggagtcaaggggacctcaaacaagaaatgctgcacgcaga
aaagcagctctagacaaagatgcacaaacgaagcaagtgaacgaagagacaagttctgag
gatgaggaattggatatatctccagtggatattgatgatgcgttggtgattgaagatgat
gatatctctgatgatgatgatgttgatcatgaagatgtgctgaaagatgattctcttcct
ttttgcatacctgataaagtgcatgacgtaaaattgggtgattcagctgaggatagtatc
tttgcttcagcagctagcgagagtcagactaacccagcttctgggtctagtagcaaagct
gctacagtcaggggttctgattctgctgactttaggaccagcaattcttatggttcgagg
ggtgcaatgtcgtttgctgctgctgctatggctgggcttggttctgctaatggcagaggt
gtaaggggaggcagagatcgatatggacgtcctctgtatggcagttccggtgaaccacca
aagttgatattcactgctggtggtaaacagcttaacaggcatttgaccatttatcaggcc
gttcaacgaatgcttgtcctggatgaggatgatgatgagaggtatggtggcagtgactac
atatcgagtgatggaagcagactctggagtgatatttacactataacctaccataaggca
gacggccaagctgataggatgtcaattggaggatcaacttctccctctccatcaaaatct
actaaatgtgactctgcttccaattccaactctgatgctcaatcccatcgcacatcactt
ttagacagcatcttgcaaggggaacttccctgtgatttggagaaatctaatcctacatat
agtatactggcattgttgcgtgtaatagagggcatgaatcagcttgcacctcgtttaaga
gcccagatggtttctgacagctatgctgaggggaaaatattgagtctagatgaacagagt
gcaacaggtgcgagggtaccttcagaggattttgtaaatagtaaactcactcctaagcta
gctcgacaaattcaagatgcccttgctttgtgcagtggtagtctccccacatggtgttat
cagctgacaaaagcttgcccattcttgtttccttttgagacccggcgtcagtacttttat
tcaactgcttttgggctatctcgtgctttatatcgtcttcagcagcagcagggtgctgat
ggtcatggattaataaatgaaagagaggtgagagttgggagattagatcgccagaaagtt
cgtgtctctcggaatcgtattttggattctgctgcaaaagtaatggagatgtattctnag
caaaaagctgtccttgaagtagaatattttggcgaagttggcacaggtttgggtcccacc
cttgagttttatactcttttaagtcgtgacctacagaaagttggacttggaatgtggagg
tcaaattcttcatcagagaaatcatctatggaaattgatgggggtgatgtagtaggagat
ctagttctagctccacttggattgttccctcgaccttggcctccaaatgccgatacttct
gaaggtagccagttttctaaagtcattgagtacttccggttgtttgggcgtgtgatggct
aaagctcttcaagatgggaggcttttagatctgccattgtcaacagcattctataaactt
gtgcttggtcaagaccttgatttgcatgacattctttcttttgattctgagtttgggaag
attttgcaagaattgcatgtcattgtttgtcggaaacaatatttacaatcagcaagctgt
gataatcgtgatgcaatatctgacttaaggttccgtggggccccaattgatgatctctgc
ttggattttactgttcctggttatccagactacattttgaaaccaggagatgaaaatgtt
gatataaataacttagaggagtacatatccctggtggttgattcaactgtgaagactgga
attatgcggcaaatggaagcatttagagcaggcttcaatcaggtctttgacatttcatca
ctgcaaatatttacgcctcatgagttggacctcctcctttgtggccgtagagagctgtgg
aaggctgagacacttgcggagcatataaaatttgatcatgggtatactgccaagagccct
gcaattgttaacttacttgagatcatgggagaattcacaccggaccagcagagggcgttc
tgccagtttgttactggtgcacctagacttccacctggtgggctggcggtactaaatccg
aagctgactatagtgagaaagcattcttcaactgcaagtaacacagcaacaaatggaact
gcagcatccgaaacagcagatgaagatttgccaagtgtgatgacttgtgcaaattacctg
aagctgcctccctactctaccaaggaaattatgtacaagaaactgctttatgcaatcaat
gaagggcagggatccttcgatttatcatga
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integrated database retrieval system
