Mangifera indica (mango): 123227197
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Entry
123227197 CDS
T07684
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123227197
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
minc04147
]
123227197
Membrane trafficking [BR:
minc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
123227197
Exosome [BR:
minc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123227197
Exosomal proteins of bladder cancer cells
123227197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_At4g14310
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
123227197
NCBI-ProteinID:
XP_044507832
LinkDB
All DBs
Position
10:complement(3168485..3174248)
Genome browser
AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHLKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSSQKDTQVIPIRRPG
SISLNQSPRTLSYSPTENAVLMCSDVDGGSYELYVIPKDSFGRGDSVQEAKKGLGGSAIF
IARNRFAVLDKSSNQVLVKNLKNEVVKKSILPIAADAIFYAGTGNLLCRAEDRVVIFDLQ
QRLVLGDLQTPFVKYVVWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRPIIIDATEYI
FKLSLLKKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMEKLSK
MLKIAEVKNDVMGQFHNALYLGDIQERIKILVNAGQLPLAYITASVHGLQDVAEQLAAEL
GDNVPSLPEGKVPSLLMPPSPVMCSGDWPLLRVMKGIFEGGLDNVGRGAVEEDEEAADAD
WGEELDMLDDDRIQNGDVAELLEDGEVAEEHDEEGGWDLEDLELPPEADTPKAPANARSS
VFVAPTPGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLHRQLGIRNFTPLKNMFLDLHSG
SHTYLRALSSAPIISLAVERGWNESASPNVRGPPALVFNFSQLEEKLKAGYKATTTGKFT
EALRLFLSILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDNPVRQQEL
AAYFTHCSLQMPHLRLALLNAMTVCYKARNLATAANFARRLLETNPTIETQAKTARQVLQ
AAERNMTDANQLNYDFRNPFVTCGATYVPIYRGQKDVSCPYCTTRFVPSQEGKLCTVCDL
AVVGADASGLLCSPTQIR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagtttgagacaaagagtaatagagtgaaggggctgagtttccacagtaag
agaccgtggatccttgcaagtcttcacagtggtgtgatccagctatgggactatcggatg
gggactctgattgataggtttgacgagcatgatggtccagttcgtggtgttcatttccac
aagtctcagcctttattcgtctctggaggggatgattacaagatcaaagtatggaattac
aagttgcataggtgtttatttactcttcttggacaccttgattatattcgtaccgtgcag
tttcatcatgagtacccatggattgtgagtgccagtgatgatcagaccatccgcatatgg
aattggcagtcacgtacttgtatttctgtgttgactggccacaatcattatgtcatgtgt
gcctcattccacctgaaagaggaccttgttgtttcagcctcgctggatcagactgttcga
gtttgggatattggtgcattgagaaagaagacagtgtctcctgcagatgacattctgcgg
ttgagtcagatgaatacagatctttttggtggtgttgatgctgttgttaaatatgtcttg
gaaggtcatgacagaggagtcaattgggcagcattccatcccaccctccctctgattgtt
tcaggagcagatgatcgtcaagtgaaattgtggcgcatgaatgaaactaaggcttgggaa
gtggacactttgagagggcacatgaataacgtgtcttgtgtaatgttccatgccaaacag
gacataattgtatccaattctgaggataaaagtattcgtgtttgggatgtaacaaaacgc
actggagttcaaactttccgccgggagcatgataggttctggattctagcatcgcatccg
gaaatgaatctcttggcagcgggtcatgatagtggcatgattgtctttaagctggagaga
gaacgacctgcttttgcagtgagtggtgattccctgttttatgccaaagatcgctttttg
cgttattatgaattttcttctcaaaaggatacacaagtcattccaattcgacggcctggt
tctataagcctgaatcagagtccaaggactctttcttacagtcctacagaaaatgctgtt
cttatgtgctcagatgtcgatgggggatcttatgagctgtatgtcatacctaaagacagc
tttggtagaggtgacagcgtgcaagaggcaaagaaaggacttggaggttcagccatcttt
attgctcggaataggtttgctgttcttgacaaaagtagcaaccaagtattagtcaagaac
ctaaaaaatgaggtggttaagaagagtatccttccaattgctgcagatgctattttctat
gctggaactggtaacttgttgtgtagggctgaggatagagtggtaatatttgatctccag
caaaggcttgttcttggtgatctgcaaaccccttttgtcaagtatgttgtttggtctaat
gatatggagagtgttgctttgctcagcaaacatgccattatcattgctaacaagaagctg
gtgcaccagtgcactcttcatgagacaattcgtgtaaagagcggagcttgggatgacaat
ggtgtttttatttacacgaccttaaatcatattaaatattgcctccccaatggagatagc
ggtattatcagaacccttgatgttccaatctacataacaaaagtttctgggaacacgatc
ttttgcttggatcgggatgggaagaacaggcctataattattgatgcaacagaatatatt
ttcaagctttctctactgaagaagaggtatgaccatgtcatgagcatgataaggaactca
caactttgtggtcaggcaatgattgcttatctgcagcagaagggcttccctgaagttgct
ctccattttgtgaaagatgaaaggactcgttttaacctggctctggagagtgggaacatt
caaattgcagttgcatcagcgaaggagatagatgaaaaagatcactggtacagattgggt
gttgaggctcttcgccagggtaatgcagggattgtggaatatgcttaccagaggaccaaa
aattttgagaggttatcttttctgtatctcatcactggaaacatggaaaagctgtccaaa
atgcttaaaatagctgaagttaagaatgatgtcatgggtcaattccataatgccctttat
ttgggtgacattcaagaacgcattaagattctggtgaatgctggtcagttgcctcttgct
tatattactgcttctgtccacggcctacaggatgttgctgagcaactagcagctgagttg
ggagataatgttccatctttgccagagggaaaagtaccctctcttctgatgcccccatcc
cctgttatgtgtagtggtgattggcctcttctgagagtcatgaagggcatctttgaaggt
ggtctcgataatgttggaaggggtgctgtagaagaagatgaagaggctgctgatgctgat
tggggtgaggagctggatatgttagatgatgatagaatacaaaatggggatgttgcagaa
cttttagaggatggggaagtggctgaagaacatgatgaagagggaggatgggaccttgaa
gatttggagcttccacctgaagcagacacaccaaaggcccctgctaatgcccggtcttca
gtttttgtggcaccaacccctggtatgcctgtgagccagatttggattcagaggtcatcc
cttgctgctgagcatgcggcagctggcaattttgatactgcaatgcggttgctacacagg
caactaggaataagaaattttactcctctgaagaacatgtttcttgatcttcactctggg
agccatacctatctacgtgcattgtcttctgctccaataatatcacttgcagttgaaaga
ggttggaatgagtctgccagcccaaatgttaggggaccaccagcactggtgtttaatttc
tctcagttggaagagaagcttaaggctggttacaaggccacaacaactgggaaatttact
gaggctcttcggctctttcttagcattctccacacaattcctttgattgtggttgagtca
aggagggaagttgatgaagtcaaggagttaattatcattgtcaaggagtatgtccttggt
ctgcaaatggagcttaagaggagggaactgaaagacaatccagtacgccagcaggagctt
gctgcctacttcactcactgcagccttcaaatgcctcacctacggctggccttgttaaat
gcaatgactgtctgctacaaggcaaggaaccttgccacagcggctaactttgcaaggcgg
ctgttggagacaaaccccacaattgagacccaagcaaagacagcaagacaagtgctgcag
gctgctgagaggaatatgacagatgccaatcaactaaattatgatttccggaatccattt
gtcacatgtggagcaacatacgtgccgatttaccgaggacagaaggatgtctcctgccca
tactgtacaaccaggtttgtgcctagccaagaagggaagctctgcacggtttgtgatctt
gcagtggttggggcagatgcttcagggttgctttgttctcccacccagattcgatga
DBGET
integrated database retrieval system
