Mangifera indica (mango): 123227341
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Entry
123227341 CDS
T07684
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
minc
Mangifera indica (mango)
Pathway
minc03020
RNA polymerase
minc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123227341
09124 Replication and repair
03420 Nucleotide excision repair
123227341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123227341
03400 DNA repair and recombination proteins [BR:
minc03400
]
123227341
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123227341
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123227341
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
123227341
NCBI-ProteinID:
XP_044508046
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All DBs
Position
10:1473507..1477047
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AA seq
319 aa
AA seq
DB search
MEGVSYQRFPRVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSEKAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCMGDQTLDV
TSKDLISSDHNVVPVDFADSSAYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW
SPAATVTFMYEPEIHINEDLMETLTLAEKQAWIESSPTKVFDLDEASGQVVVVDPEAYTY
DDEVIKKAEAMGKPGLVEIYGKEDGFIFTVESTGAIKASQMVLNAIEVLKQKLDAVRLSE
DTIEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgtttcttaccagcgatttcccagagtcaaaattcgcgagctcaaggacgac
tacgcgaagttcgagctccgcgacaccgacgcgtcgatggccaatgctcttcggcgcgtg
atgatagcagaggttcctaccattgctatcgaccttgtcgaaatagaagtaaactcttcc
gtcctcaacgacgaattcatagcccaccgtctcggtcttatccctctcaccagcgagaaa
gccatgagcatgcgcttctcacgtgattgcgacgcgtgtgatggagacggccagtgcgaa
tattgctctgtggagttccatttgagagccaagtgtatgggcgaccagactctggatgtc
acgagtaaggacttgatcagttccgaccataacgttgttcctgtagacttcgccgattct
tcagcttacgattcaactgatcagcaaaggggcattatcattgtgaagttgcgtcgtggt
caagaactaaggcttagagcaatagctagaaaagggattggcaaagatcatgcaaaatgg
tcacctgctgcaactgtcactttcatgtacgaaccagagatccacatcaatgaagattta
atggaaactctgacgcttgcagagaaacaagcttggattgaaagtagtccaaccaaagtg
tttgaccttgatgaagcttctggacaggttgtagtggttgatcctgaggcatacacttac
gatgatgaagtgattaagaaggcagaagccatggggaagccaggacttgtagagatctat
ggcaaagaggacggctttatattcactgtggaatctaccggtgcaattaaagcttctcag
atggtgttgaatgccatagaagttcttaaacaaaagctggatgcagttcgcctgtctgag
gataccatagaagctgacgatcagtttggtgaacttggtgcacatatgcgaggtggatga
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