KEGG   Mangifera indica (mango): 123227605
Entry
123227605         CDS       T07684                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
minc  Mangifera indica (mango)
Pathway
minc04144  Endocytosis
minc04145  Phagosome
minc04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:minc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    123227605
   04145 Phagosome
    123227605
   04148 Efferocytosis
    123227605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:minc04131]
    123227605
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:minc04147]
    123227605
   04031 GTP-binding proteins [BR:minc04031]
    123227605
Membrane trafficking [BR:minc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    123227605
 Endosome - Lysosome transport
    123227605
Exosome [BR:minc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123227605
  Exosomal proteins of other body fluids (saliva and urine)
   123227605
  Exosomal proteins of colorectal cancer cells
   123227605
  Exosomal proteins of bladder cancer cells
   123227605
GTP-binding proteins [BR:minc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    123227605
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 123227605
NCBI-ProteinID: XP_044508599
LinkDB
Position
10:3471127..3475179
AA seq 201 aa
MGCSSSLPDRNSGRLSGLNGSESSGAPDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPE
SFNKAQYWVKELQKHGSPDIVMALVGNKADLHENREVPTQDGIEYAEKNGMFFIETSAKT
ADNINQLFEEIAKRLPRPSTS
NT seq 606 nt   +upstreamnt  +downstreamnt
atgggttgctcttcttcccttcctgataggaattctgggcggttgagtggacttaatggt
tcagagagcagtggagcacctgatgcgaaaaacctgcgtgttaagctggttttgttaggt
gattcaggtgttgggaaaagttgtatagttcttcgctttgttcgtggccagtttgaccca
acatccaaggttacagttggagcttcattcttgtcacaaacaatagctctgcaagattct
acgacagttaaatttgaaatatgggacacagctggtcaagaaagatatgctgcactggca
ccgctgtactacagaggtgctgcagttgcagttattgtgtatgatataacaagcccggag
tcattcaacaaagcacaatattgggttaaggagctacaaaaacatgggagtcctgatata
gtcatggctttagttggtaacaaagctgatcttcatgagaatcgagaagttccaacacag
gatggcattgagtatgcagagaagaacgggatgttctttattgagacatctgccaagact
gcagataatataaatcagctgtttgaggaaattgctaaacgacttccccgtccatcgacc
tcataa

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