Mangifera indica (mango): 123227657
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Entry
123227657 CDS
T07684
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like
KO
K06670
cohesin complex subunit SCC1
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123227657
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123227657
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
123227657
NCBI-ProteinID:
XP_044508689
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Position
10:complement(16110976..16120324)
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AA seq
1114 aa
AA seq
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MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGLSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNDIFQGNYVDHHVSTRDQITLQDTMDGVVYSTSQFGLDERFGDGDACQIGLDLDEEL
LKVTAAGHGDISNADPQGSVKPLTPWEHDSISEQKNETSEAMTLNDNANQLERLGVYTES
VEYAEAPSTPGLVQEPNLFCVQEAPACDDHFESEDRNSNELVAAGSGHHVRDLEVKHVKP
LGDSVNSMTMVSDYSEGTIGALDGSDRLENMKNAGVNKNVPNIMSVEQGIRSDETAASPS
CSHVTSDAQEQNHRTYPDSTNEPVSEGCLMDGHPVEMPSNVLKPCSLYLSQPDMSSAGNG
HDNAIATTLQSEDVEPFSSEISGRDEARVEGRGEECHVSDILQSKKNQISGPSVCGELLA
DNKKSDELLDNVIFNDHLENLNNSTISELPEPEKLLSVPEGLLDIPNDLLVASTPEKEAL
AGSDGVEARNEFVSGKKRSHTESTLTFESLNSSESFGVARSKKTSESIPDDDDLLSSILV
GRKSSVLKLKPTPPPPEVASRKRIRSAPQSSALKRKVFMDDTMVLHGDIIRQQLTNTEDI
RRIRKKAPCTCSEILMIQIQFLEDQIFSEPVFAGMSARLMSLHCETPDLSRIRVSETDEN
HGSSEPANDVERSYRFNVEGSGEEGSKGPELHVEAQHAGNPISDHFLGSHDGDAQGDANA
TNAITDPPELERMQNKPLAEVTEMDIDITNFEVAETANCAADTDGPVEIQSMPGEGTTDG
ADASLQMDALGLTPGQKLDFQSVEDDATLDTSNGKVVDAAEGEDPVAIGGELIARDELPL
GEGKVGVSVENQADSLIDCTANGVLNEDGFLSADLGCDSFDPKSDSVYREESTLYSTNLD
KHDTDLKDTSMNDGENPIFPDTDHPAAEDRGELEDIPFGHDTEFLNVDDDEVAEDCDEGD
GHPEDPRLLENSGWSSRTRAVAKYLQTLFEKEPVHGRKVLALDNLLAGKTRKEASRMFFE
TLVLKTKDYIQVEQPKSLENINIQPRAKLIKSDF
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcacagtttattttggctaagaaagggcctttagggactatatggatagct
gctcatttggagaggaagcttcgaaagaatcaggtggctgatactgatattggactgtca
gtagactcaattctttttcctgaagtaccaattgcacttaggttgtccagccatcttttg
cttggcgtggtgaggatatattctagaaaggtgaattaccttttcgatgattgcagtgag
gctttgcttaagataaagcaagcttttcgctcaactgcagttgatttacccccagaggaa
tcaactgcaccatatcactctatcaccttgccagagacttttgatcttgatgattttgag
ttgccagataatgatatttttcaaggtaactatgttgatcatcacgtcagtacaagggat
caaatcactctccaagataccatggatggtgtggtttactccacatctcagtttggattg
gatgagcggtttggtgatggtgatgcatgtcagattggtttggaccttgatgaggagctg
ttaaaggttactgctgcagggcatggtgacatttcaaatgctgatcctcaggggtctgtc
aaaccactgacaccttgggagcatgatagtattagtgagcagaaaaatgaaacgtcagaa
gccatgacattgaatgacaatgcaaatcagcttgaaagactcggtgtctataccgaatct
gttgaatatgctgaagcaccatctactccagggttggtacaagagccaaatttgttctgt
gtgcaggaggctccggcctgtgatgatcattttgagtcagaagatcgcaattccaatgag
ctagtggctgcggggagtggccaccatgtcagagatctggaagtcaaacatgtgaagcct
cttggtgactctgtcaattcaatgactatggtatcagactattcagaggggaccattggt
gcgctagatggttcagatagattggaaaacatgaaaaatgctggtgtaaacaagaatgtt
ccaaatataatgtctgtagaacaaggaattaggtcagatgaaactgctgcatctcctagt
tgctctcatgtcacctctgatgcacaggaacagaatcatagaacttatccagatagcacc
aatgagcctgtgtctgaaggctgtttgatggatggccatcctgtagagatgccatccaat
gtgttgaagccatgcagcttatacttgagtcaacctgatatgtcttctgctggaaatgga
catgataatgcaattgctacaaccttacaatctgaggatgttgagccattctcatcagag
atatccggaagggatgaggctcgtgttgaggggcgaggtgaagagtgccatgtgtcagac
attctgcaatcaaagaaaaatcagatatcagggccatcggtatgtggagaattacttgca
gataacaagaaatcagatgagcttttggacaatgtgatttttaatgatcatttagaaaat
cttaataattccacaatatcagaattgcctgaaccggaaaagctactctctgtaccagag
gggcttcttgatataccaaatgatttgctagttgcttctacaccagagaaagaagcttta
gcagggagtgatggagttgaggctagaaacgaatttgtttcagggaaaaaacgtagtcac
acagaaagtacactgacttttgagagtttaaactcatctgaatcctttggggtggccaga
tctaagaaaacttcagagtcaatccctgacgatgatgatctgttatcatctatattagtt
ggaagaaaatcttcagttttaaaattgaagcccactccacctccccctgaagtagcatca
agaaaaagaatccgttctgcacctcaaagtagtgctttgaagagaaaggtgtttatggat
gacaccatggtcttgcatggcgatataatacgccaacaattgacaaatactgaagacata
cgccggattcggaaaaaagctccttgcacttgttctgaaattttgatgattcagatacag
ttcttagaggatcaaatattcagtgaacccgtttttgctggtatgtcagcacgactgatg
agtttgcactgtgaaacacctgatctaagcagaatcagggtttccgaaactgatgaaaat
catggttcttctgaaccagcaaacgatgtggagcgctcctataggtttaatgttgaaggc
agtggagaggaggggagcaaaggtcccgagcttcatgttgaagcacagcatgctgggaac
cccatcagtgaccacttcttaggatcgcatgatggtgacgctcaaggggatgcaaatgcc
acaaatgctattactgatccacctgagcttgaaagaatgcaaaataaacccttggctgag
gtaactgaaatggacattgacatcactaattttgaagttgctgagacagctaattgcgct
gcagacactgatggtcctgtagaaattcaaagcatgcccggtgaaggtacaactgatggt
gcagatgcttctctgcagatggatgctttgggtcttacacctgggcagaaattggatttt
cagtctgttgaagacgatgctactttggatacaagcaatggaaaagtagttgatgctgct
gaaggagaagatcctgttgcaattggtggtgaattgatagccagggatgaacttcctttg
ggggaaggtaaagttggtgtgtctgttgaaaaccaggctgatagcctgatagattgtact
gcaaatggtgttctgaatgaagatgggttcctgtctgcggacttgggttgtgatagcttt
gacccaaagtctgactctgtgtatcgtgaagaatctacactatattctacaaatttagat
aaacatgatactgatttgaaagatacctcgatgaatgatggagaaaacccaatctttcct
gacactgaccatcctgctgctgaagatcgtggtgaacttgaagatatcccgtttgggcat
gatacagaatttctgaatgtagatgatgatgaagtagctgaagattgtgacgagggtgat
gggcatcctgaagatcctcgccttcttgagaatagtggatggtcttcccgcacgagggct
gttgctaagtacttgcaaactctatttgagaaggaacctgtacatggtagaaaggttctt
gccttggacaacttattagctggtaaaactcgtaaggaagcatcgagaatgttctttgaa
acactggttctgaaaacaaaggactacatccaggtagagcagcccaagtccttggagaac
attaatatacagccacgagcgaagctcataaaatcagacttctga
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