Mangifera indica (mango): 123227711
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Entry
123227711 CDS
T07684
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123227711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123227711
Spliceosome [BR:
minc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123227711
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
123227711
NCBI-ProteinID:
XP_044508761
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Position
10:complement(4000358..4004694)
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AA seq
842 aa
AA seq
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MDRLSEKDKSSKRSRDDRERERQHRHRDRDEKHRDREHHHHRSSPDHKSSKREDREGSRD
RNFKREKSIDDHRESRRNSERSHEREGTKHRDREVKREELDGDDVEIDERKKRKEREEIE
ERDEKKARIFYDNKGKRRLESSFVKEEDSEGASEDVNVNEVNVKKEVSDDATARGGSANS
NRAAVASFNVVSRTLPDSSMATGDHPLPAKVSSIYTTNENKGVSITRSHEVPGKSSTDGT
SSAAGKSGTLSLDALAKAKKALQMQKELSAKLKKIPLLNKGTSSDGSSVSGLKEGVKVPS
SGTGITQGTVTKTANALSAGAMPSSSNLPIAVAASVKPPAGGVPTIPGLSNIHNIEAVKR
AQELAAKMGFHQDPEFAPLINLFPGQLPTDAAVPQKSTKAPVLRVDALGREIDEHGNVVN
VTKPSNLSTLKVNINKQKKDAFQILKPEVEVDPESNPHFDQRMGINKNKLLRPKRMTFQF
VEEGKWSKEAEILRVKSQFGEAGAKERQAKQAQLAKVKGGADINPNLIEVAERVVTKEKP
KDTIPEIEWWDMPLLLNGSYVDISNGGMVEDKLKKEKITIYVEHPCPIEPPAEAAPPPPQ
PLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRL
EKEIRSAAAEHEQAHIDRNVARKLTPAERREKKERKLFDDSNSLDTVVSVYKINDLSHPK
TRFKVDVNAHENRLTGCAVITEGISVVVVEGGIKSIKRYGKLMLRRIDWAKAVNEEDEDE
DENSEKPLNKCMLVWQGSVAKLSFNRFSVHECMTEAAARKVFADTGVAHYWDLAISFTDD
QM
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtctctctgaaaaggacaaatcgtccaaacgttcacgggacgaccgtgaacgt
gaacgccagcaccgtcacagagaccgagacgaaaaacaccgtgatcgagagcatcatcac
caccgatcatcgccagatcacaaatcgtccaagcgcgaagaccgagaaggttcacgcgac
cgcaatttcaagcgggagaaatcgatcgacgatcatcgcgagtcgaggcgcaacagtgag
agatcgcatgagagggagggaacgaagcatcgtgatcgtgaagtgaagcgcgaggaattg
gacggtgatgacgtggaaatcgatgagagaaagaagaggaaagagagagaagaaatcgag
gagagagatgagaagaaggctaggattttttatgataacaaagggaagagaaggcttgaa
agtagcttcgtaaaagaagaggacagcgagggtgcttctgaagatgtaaatgttaacgaa
gtcaatgtgaagaaagaagtcagtgatgatgcgacggctcgtgggggctctgccaattcg
aatcgtgctgctgttgcatcatttaatgtggtatcaaggactctgcctgacagttctatg
gccactggtgatcatccccttcctgcaaaggtatcttcaatttataccacaaatgaaaat
aagggagttagtattaccagatctcatgaggttcctggaaaatctagtacagatgggaca
tcttcagctgctgggaaaagtggaactctatcactagatgctttagccaaagctaagaaa
gctttacaaatgcagaaggaattgtcggcaaagctgaagaagataccattgttgaacaag
ggcacaagttcagatggtagctcagtctctggactgaaggagggagtgaaagtgccatcc
tctggtactggaataacacagggaacagtgacaaaaaccgcaaatgctttatcagctggt
gcaatgcctagttcatcaaacttaccaattgctgtagcagcttctgtgaagccacctgca
ggtggggtgcctaccattcctggcctctctaatatacacaacattgaagctgttaaacgt
gctcaagagcttgctgctaagatgggctttcatcaggaccctgaatttgcacctcttata
aacctatttcctggacaattgccaacagatgctgctgttccccagaagtctaccaaggct
cctgttcttcgtgtggatgcacttggtagggaaatagatgaacatggaaatgtagtgaat
gtgactaaaccaagcaacctaagcactctaaaggtcaacatcaacaaacagaaaaaagat
gcatttcaaattcttaaacctgaggtggaggtggatccggaatcaaatcctcattttgat
cagagaatgggtataaataaaaacaagcttttgagacccaaacggatgactttccaattt
gtagaggagggaaaatggtcaaaagaagctgagattcttagagtcaagagtcaatttgga
gaagctggagcaaaggagcgacaggcgaagcaagcacagttggcaaaagtgaagggaggg
gctgacattaatcctaatttgatagaggttgcagaaagagttgtgaccaaggaaaaacct
aaggacacaattcctgaaatagagtggtgggatatgcctctattgcttaatggttcttat
gttgacatatccaatggtggcatggttgaagataaattaaagaaggaaaaaatcactatc
tatgttgaacatccttgtcctattgagcctcctgctgaggcagctccgcccccacctcaa
ccactgaagctaaccaagaaggaacaaaagaagctccgtactcaaaggcggctggcaagg
gagaaagatagacaggagatgataagacaaggcttgatcgaacctcctaaacctaaagtt
aaaatgagcaatttgatgaaagttcttggttcagaagcaacccaagatcccactagacta
gaaaaagaaatccgtagtgctgctgctgagcatgaacaagctcatatcgacaggaatgtt
gcacgcaagcttacacctgctgagcgccgagagaagaaagagaggaaactgtttgatgac
tctaattctcttgatactgttgtttctgtttacaagatcaatgacctttcacaccctaag
acccgtttcaaagttgatgttaatgcccatgaaaaccgtttaactggttgtgctgtaatt
actgagggaatcagtgttgtggttgttgaaggtgggatcaaatccatcaagagatatggg
aagcttatgcttaggcgtatagactgggcgaaagcagtgaatgaagaagacgaagatgaa
gatgagaattctgagaaacccctcaataagtgtatgctagtgtggcagggcagtgttgcc
aaactaagcttcaatagattttccgttcatgagtgcatgactgaagcagctgctaggaaa
gtttttgccgacactggcgtagcacattactgggatctggctatcagcttcactgatgac
caaatgtaa
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