Mangifera indica (mango): 123227716
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Entry
123227716 CDS
T07684
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5-like
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
minc
Mangifera indica (mango)
Pathway
minc03022
Basal transcription factors
minc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123227716
09124 Replication and repair
03420 Nucleotide excision repair
123227716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123227716
03400 DNA repair and recombination proteins [BR:
minc03400
]
123227716
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123227716
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123227716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
123227716
NCBI-ProteinID:
XP_044508768
LinkDB
All DBs
Position
10:2975611..2976781
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AA seq
70 aa
AA seq
DB search
MVNAIKGLFISCDIPMAQFIINLNASMPTSQKFIIHILDNTHMFVQPHAAEMIRSAIAEF
RDANSYEKPA
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgccattaaaggactgtttatttcctgtgacataccaatggcacagttcatt
atcaacttgaatgcttcgatgcccacatcacagaaattcataatacacatcttggataat
actcacatgtttgtgcaaccccatgcagccgaaatgattcgaagtgccattgctgaattt
agggacgcaaattcctatgagaagcctgcataa
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