Mangifera indica (mango): 123227794
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Entry
123227794 CDS
T07684
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
minc03016
]
123227794
Transfer RNA biogenesis [BR:
minc03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
123227794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
WD40_WDHD1_1st
TPR_GEMI5
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_HPS5
C_GCAxxG_C_C
Motif
Other DBs
NCBI-GeneID:
123227794
NCBI-ProteinID:
XP_044508859
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All DBs
Position
10:4787076..4792567
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AA seq
1323 aa
AA seq
DB search
MKNLKLYSEVSLNLELPSKEETLLFSALDIERNRLFFASSANKIYSSQLSSFQNEGVPAK
TSISAEVDQVDLDAGDFITSFDYLMEKEALIVGTSDGLLQLHSMDSNSTEVVGKVEGGVK
CISPSPDGDLLAVISGFGQILVMTHDWDLLYENPLEDLPEGVDVCETDFSSTNTSESPIS
WRGDGKYFATLSNSSSSTSLHKSLKVWERDSGTLQASSEPQVFMGAVLEWMPSGAKIAAV
YDRKVENKCPSIVFFERNGLERSSFSINEQIDATVEILKWNCSSDLLAAVIRCGNYDFVK
IWFFSNNHWYLKHEVRYLRQAGVRFMWHPTKPLQLICWTLDGQITICDFIWTTAVMENSI
ALVIDGSKILVTPLSLSLIPPPMCLFSLTFPSAVCEMAFYTNSSKNCLAASLSDGCLCVV
ELPSSDMWEEMDGKEFCVEASISDIAFGSFIHLIWLDSHILLSISPNGFRHCSSSFQAAS
SEGALHGFYIQEITLECSENQAPGLITCSGWHAKISYQNSLEGFVIGIAPNPAKRCSAFV
QFDGGKIVEYTSKVGLTRDTVKHDDINFSSSCPWMSAVLVGSDGPLKPLLFGLDDVGRLQ
ASGKIICYNCSSFSFYSKLGDQVISHLILATKQDLLFIVDISHILCGELELKYENFMHVA
NRRKEEESISFINIWERGAKIVGVLHGDEAAVILQTTRGNLECIYPRKLVLSSIVNALIQ
CRFRDALVMVRRHRIDFNVIVDHCGWQEFLQSASEFVKQVKNLSHITDFVCAIKKENIIQ
TLYKKFEFLSVQCHEESKDVQANFRDSDANKVSSVLLAIRKALEEQVPESPARELCILTT
LARSDPPALEEALERIKVIRETELLGSNDPRRASYPSAEEALKHLLWLSDPGAVYEAALG
LYDLNLAAIVALNSQRDPKEFLPFLQGLERMPALLMRYNIDLSLHRFENALKHLVSLGDA
YYADSLNLMKKYPQLFPLGLQLITNPVKRGQVLEVWADHLSDEKCFEDAATTYLCCTSLE
KAMKAYRACGNWSGVLTVAGLLKLGKEEVVQLAHELCEEFQALGKPGEAAKIALEYCQDV
NSGINLLISARDWEEALRVAFMHTREDLISEVKNASLDCANTMICEYKEGLEKVGKYLAR
YLAVRQRRLLLAAKLQAEDRTVHDLDDDTASETSSAVSGMSVYTTGTRKGSAASTTSTAA
SRARDARRQRNRGKIRPGSPGEELALVDHLMGMSLTDGAKNELRSLLVSLVMLGEEETAR
KLQCTAENFQLSQMAAHKLAEDTVSSDIVNEQAHNLERYIKLVRSELKSSEAFSWQSKVF
RSP
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctgaaactctactcagaggtttctctgaatctggagttaccatcaaaggaa
gaaactctgctgttctcagctttggacatcgagcggaaccgattattcttcgcttcttcg
gccaataaaatttacagctctcagctttcttcttttcaaaatgaaggagtgccagccaag
acctcaatttctgctgaagttgatcaagttgatttggatgctggggacttcattacatca
tttgattatcttatggagaaagaagcactgatagtgggaacttctgatggacttctacag
ctgcattccatggatagtaattcaacagaagttgttggtaaggttgagggtggtgttaag
tgcatatcacctagtccggatggagatctgcttgcggtaatttctggttttgggcagatc
ctagtgatgactcatgattgggatttattgtatgagaatccactggaggatcttcctgaa
ggtgttgacgtatgtgaaactgatttttcttccacaaatacatctgagagtcccatttca
tggcgaggtgatgggaaatactttgccactctaagtaattcaagcagttctacttccttg
cataagagccttaaggtttgggaacgagattctgggacattgcaagcttcttcagaacca
caggtattcatgggagcagttttagaatggatgcccagtggagcaaaaattgcagctgtt
tatgacagaaaagtggaaaataaatgcccttctatagttttctttgagaggaatgggtta
gaaagaagttccttcagcattaacgagcaaatagatgcaactgtagaaattttgaagtgg
aattgcagctcagatcttcttgcagctgttatcaggtgtgggaattatgactttgttaag
atctggtttttcagcaacaatcactggtatttaaagcatgaagttagatacttgaggcag
gctggcgtgaggttcatgtggcatccaacaaagccattgcagttgatatgttggactctt
gatgggcaaattacaatttgtgactttatctggacaacagctgtcatggagaactcaatt
gcattagtcattgatggctccaagattcttgtaacccctctttctttatccttaattcca
cctcctatgtgtttatttagcctgacatttccatctgctgtctgtgagatggctttctat
accaatagttctaagaattgtctggctgcatctttgtcagatggttgtttgtgtgttgtg
gagcttccttcatctgatatgtgggaagaaatggatggcaaagaattttgtgttgaagcc
tccatttctgatatagcatttggatcattcatacatctaatatggttggactcacatatt
ctcctttctatttcgcctaatgggttcaggcattgcagttcctcttttcaagctgcatca
agtgagggtgcacttcatggtttctatattcaggagattacacttgagtgttctgagaat
caagccccaggtttaattacttgttctggctggcatgctaaaatttcctaccagaattcc
ctagaagggtttgtgattggcattgctccaaatcctgctaaaagatgttcagcatttgtt
cagtttgatggtggaaaaattgttgagtacacttcaaaagtaggcctaaccagagatact
gtaaaacatgatgacataaacttttcatcatcttgtccttggatgagtgcggttctggtt
ggtagtgatgggccattgaagcctttgctatttggacttgatgatgttggtcggctgcaa
gctagtgggaaaatcatatgctacaactgcagtagtttctcattttactcaaaattgggc
gaccaagtgatctcacatttgatccttgcaactaaacaagatttactctttattgtagat
attagtcatatattgtgtggagaattagagttgaagtatgaaaacttcatgcatgttgct
aatagaagaaaagaagaagaaagcattagctttataaatatttgggaaagaggtgccaaa
attgttggtgtactgcatggagatgaagctgcagtcatattacagacaacccggggaaac
ctagaatgcatctatcctagaaaattggtactatcttcaatcgtcaatgcgttgatccaa
tgtcgcttcagagatgcattagttatggtgaggcggcataggattgattttaatgttatt
gttgaccattgtggttggcaagaatttctccaatcagcttcggagtttgttaagcaggtt
aagaatttgagccacataactgattttgtttgtgccattaagaaagaaaatattatacaa
actttatacaaaaaatttgaatttctctctgtgcaatgccatgaggagtctaaagatgtg
caagccaatttcagggattccgatgctaacaaggtatcttcagtcttgctggccataagg
aaagctcttgaggaacaggtaccagaaagtccagccagggaactgtgcattttgactact
ctagctcgtagcgatccccctgctcttgaagaggctttagaaagaataaaagttattcgt
gaaactgaattattaggttctaatgacccaaggagagcgtcttacccttctgctgaagag
gccttgaagcatcttctgtggttatcagatcctggggccgtttatgaagctgctttaggc
ctttatgatttgaaccttgctgctattgtagcattaaattcccaaagggacccaaaggag
tttcttccttttcttcaaggattggaacgcatgccagctctcttgatgcgctataatatt
gaccttagtttgcataggtttgagaatgctcttaaacaccttgtttccttaggtgatgct
tactatgcagattctttgaacctcatgaaaaagtatcctcaactctttccactggggctt
caactgattacaaatcctgtcaagagaggacaagtcctcgaggtttgggcagatcatctt
agtgatgagaaatgctttgaggatgctgctacaacttatttatgttgtactagtttggaa
aaggctatgaaggcatatcgtgcttgtggtaattggagcggggtactgacagttgctggg
cttctcaaattgggaaaagaggaggtagtacaactggctcatgaactctgtgaagaattc
caagccctaggtaaaccaggggaagctgccaaaattgctttggaatattgtcaggatgtt
aacagtgggataaatttgttaattagtgcaagggactgggaggaagctttgagggttgct
ttcatgcacacgagagaagatttaatctcagaagtgaagaatgcatctctggattgtgca
aacactatgatttgtgaatacaaggaaggcttggagaaagtaggaaagtacttggcccgc
tacttagctgttcgacaaagaagattactgcttgcagcaaaacttcaggcagaggatcga
acagtgcatgatcttgatgatgatactgcttcagaaactagtagtgctgtcagtggaatg
agtgtgtacacaacagggacgaggaagggctctgctgcttccaccacctcaactgcggct
agcagggcaagagatgcaaggcgccagagaaacagagggaaaatccgtcctggaagccct
ggggaggagttggctctagtagaccatttgatgggcatgtctctaacagatggagcaaag
aatgagcttagatcattgttagtatctcttgtgatgcttggggaagaggaaactgcaagg
aagctgcaatgtacagctgagaactttcaactgtcgcaaatggcagcacacaaactagct
gaagatacagtgtctagtgatatcgtgaatgaacaagctcataatttggagcgttacatt
aaattagtaagaagtgaactgaaaagttcagaggccttttcgtggcaatcaaaagtattc
cgttctccctga
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