Mangifera indica (mango): 123227970
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Entry
123227970 CDS
T07684
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
minc
Mangifera indica (mango)
Pathway
minc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123227970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123227970
03036 Chromosome and associated proteins [BR:
minc03036
]
123227970
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123227970
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123227970
PBAF complex
123227970
GBAF(ncBAF) complex
123227970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
123227970
NCBI-ProteinID:
XP_044509073
LinkDB
All DBs
Position
10:complement(2538919..2544980)
Genome browser
AA seq
992 aa
AA seq
DB search
MEVKHREAGSLPAAMSSADVGVESAASEPASSRRRAGGQKRKAGALSTGTTSSTPSKRIT
REKNSISHTPIYNHNGPLTRARQGPSTLSASAVETALAGGKLEAARDDAKVVEELNKESE
QWQALEAKIEADFEAIRSRDISVHVVPTHCGWFSWTRIHPLEEQGLPSFFNGKSQDQTPD
IYMEIRNWIMKKYHANPNTQIELKDLSALEVGRVDDRQDVMEFLDYWGLINFHPFPPKLT
AANADGDRLANADCDMSASADDEGAAKKDSLLEELYHFDEIQLCPRAAPKPKIISPTAPS
RLFPESAIAEELVKPEGPSVEYHCNYCSADCSRKRYHCQKQADFDLCTDCFNDGKFGSGM
SSTDFILMVPAEAAGLSGEKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFV
QMPIEDVFFDHDDSVDANSKETADPVATNDDASAPKDVPETSESKTGGNEGQTQIFPSET
SKSEDANTVKTCQETSRTEDVNKVKVGEEMVKSEDTSGVKVQETDENIALKALREAFEAV
GYHPPESPHSFAEVGNPVMTLAAFLSLLVGPGVATASTRSSLKSISGNSPAMQLAARHCF
VLEDPPGDKEPTQSESVVAKIANQDTQNNNNLEDRKHKEDNTTTMLDERDDNDSKLTEES
VVEEQRTSTSSNDKPTEDLNAVKAPGNKVIPEKVESGDLNKLGNKELPKENQPNIVEKSN
NLSSKFALSSVKESGEGNSSIEAAKDVELSSDALPSEKSEAGQPVISSFKAEPSQTTEAP
KDVDMVSNPLESNEPQQTDSVIVNGTTTGEDQTKDSKEEKQDHREVKDEHNIDKIGQAAV
TALSAAAVKAKLLANQEEDHIQQLATSLIEKQLQKLEAKLAFFNEMDNVTLRVREQMERS
RQRLYHERAQIIAARLSSSRPMPTLIPANRMPPNFANSAARPPMSMTSPRPPMSRPMGTV
GATPSNSFVSTAPAGRAIRPLNQDKLSSVGMK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaagcaccgtgaagcagggagtctgccggcggctatgagctcagcagatgtc
ggggtggagtcagctgcatcagagccagcttcgtcacggcgtcgagcgggaggccagaaa
aggaaagccggagcgctttcaacaggcaccacgtcgtcaacgccgtcgaaacgaatcact
cgcgaaaagaactcaatttctcacaccccgatctacaaccacaacgggcctttgacgaga
gctcgccagggccccagcactctgagtgcatccgcggtagaaacggctttggcgggtgga
aagctcgaagctgcacgtgatgacgcgaaggtggttgaggaactgaacaaagagagtgaa
cagtggcaggctttggaggcgaaaatcgaggcggattttgaggcgattagatctcgtgat
attagtgttcatgtggtgccaacacattgtggttggttttcgtggacaagaattcatcct
cttgaggagcaaggattgccttcttttttcaatgggaaatcccaggaccaaactcctgat
atatatatggagatacgtaattggattatgaaaaagtatcatgcaaatccaaacactcaa
attgaattgaaagatttgtcggcacttgaggttggacgtgtggatgatagacaggacgtg
atggagttcttggactactggggcttaatcaatttccatccattcccacccaaattgaca
gctgcaaatgctgatggtgataggttggcaaatgctgattgtgacatgtcagcaagtgct
gatgatgagggagcagcaaaaaaggattccttgcttgaagaattgtatcactttgatgaa
attcaattatgtcctcgtgctgctccaaagcctaagataatatctcccactgctccatct
aggttgtttccagagtctgcaattgctgaagagttggtgaagcctgaggggccatctgtt
gagtaccattgcaactattgttcggctgattgctctcgtaagcgctatcattgtcaaaag
caggcagattttgatctatgcactgattgcttcaatgatgggaagtttggctctggcatg
tcatcaacggattttattctcatggtgcctgctgaagctgctggtttgagtggtgagaag
tggacagatcaggagacccttctcctcctcgaagctttggaactttataaagaaaactgg
aatgagattgcagagcacgtcgccactaaaacaaaagctcaatgtatattgcactttgtt
caaatgcctattgaggatgtgttttttgatcatgatgatagtgtagatgccaattcaaaa
gaaactgcagatcctgttgcaaccaatgacgatgcatctgcccctaaagatgttcctgaa
acatcagaaagtaagacaggcggaaatgagggtcagacccaaatttttccttcggaaact
tcaaaatcagaagatgcaaatactgtgaaaacatgtcaggaaacttcaagaacagaagac
gtaaataaagttaaagttggtgaagaaatggtaaaatcagaagacaccagtggagtgaaa
gtccaggagactgatgaaaacattgcattgaaggctcttagggaagcattcgaagctgtt
ggttatcatcctcctgaaagcccacattcctttgctgaagttggaaaccctgtcatgaca
ttggcagcatttttgtcactgctggtggggcctggtgttgctactgcatcaactcgtagt
tctttgaaatccatatctggcaattctcctgccatgcagttggctgcaaggcactgcttt
gttttggaagatcccccaggtgacaaggaaccgactcagtctgagagtgttgttgccaag
attgccaatcaagacactcagaataataataacctggaagacagaaagcacaaagaggat
aacactaccacaatgctggatgaaagagatgataatgacagcaagttaaccgaagagtct
gttgtagaagaacagagaacatcaacctcttcaaatgataaacccacagaggacttaaat
gctgtaaaagcaccaggcaacaaagttattcctgaaaaagttgaatctggtgatttgaat
aaattaggcaataaagaattgcccaaggaaaatcaaccaaacattgtggagaaatcaaat
aatttatcatccaagtttgctctaagctctgtgaaagagtctggagagggaaattcatcg
atagaggctgccaaagatgttgaattgtcttctgatgcgcttccatcggaaaagagtgag
gctggtcaaccagttatatcaagtttcaaagcagagccctctcaaactacagaagcacca
aaggatgtggatatggtgtctaatcccttggaatcgaatgagcctcaacagactgattca
gttattgtaaatggaacaactacaggtgaggatcaaactaaggatagtaaagaagagaag
caggaccatagagaggtaaaagatgaacataatattgataaaatagggcaagcggcagtt
actgcactttctgctgcagcagtgaaggcaaaacttcttgccaatcaggaagaggatcat
attcaacaacttgctacatcattgatagaaaagcagttacaaaagttagaagccaagtta
gctttctttaatgagatggataatgtgactttgagggttagagagcagatggagaggtca
agacagaggctttaccatgaacgggctcaaataattgcagctcgacttagctcttccaga
ccaatgccaacattgatacctgctaacagaatgccaccaaactttgctaactcagctgca
agacctccaatgagcatgacttccccacggccaccaatgtcaagacccatggggactgta
ggtgctaccccttctaactcatttgtctcaacagcaccggctggaagagcaattcggcct
ttgaatcaggacaaactttcttcagttggaatgaaatag
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