Mangifera indica (mango): 123228043
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Entry
123228043 CDS
T07684
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123228043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123228043
Enzymes [BR:
minc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
123228043
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123228043
mRNA degradation factors
5'-3' decay
Decapping complex
123228043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
123228043
NCBI-ProteinID:
XP_044509176
LinkDB
All DBs
Position
10:3628182..3634776
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AA seq
322 aa
AA seq
DB search
MSGIHRSSSAPHKHGGLPPQELLDDLCSRFVLNVPKEDQQSFERILFLVEYAHWFYEDNS
VENNPSLKSLNLKEFTSLLFNSCDVLRPYVAHLDDIFKDFTSYKVRVPVTGAIILDETYE
RCILVKGWKGSSWSFPRGKKNKDEEDHTCAIREVLEETGFDVSMLLNKDDYIELIFGQQR
VRLYIIAGVRDNTAFAPQTKKEISEIAWHRLDDLQPASEDVISHGVTGLKLYMVAPFLAS
LKKWISAHKPPISPNPDMPLKGICVWKAKSSSIGSNTMILENQSTKPATDSHPPDTGPGT
SFRNFRFNTAAILQAMEAGFSN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtatccatcgatcctcaagcgcgccgcataaacacggcggccttcctcctcaa
gaacttctcgatgatctctgcagtcgatttgtgttgaatgtgcctaaagaagatcaacaa
tcatttgagaggattctgtttcttgtggagtacgcacattggttctacgaggataattca
gtggaaaataatccatcactgaagtcattaaatttgaaggagttcacttcattacttttt
aacagttgtgatgtacttagaccttatgttgctcacttagacgacatattcaaggatttc
acttcttacaaggttcgagttccggtaactggggcaatcattttggatgaaacgtatgaa
cggtgcatattagtgaagggatggaaagggtcaagttggagttttccaagagggaaaaaa
aacaaagatgaggaagatcacacatgtgccatccgagaagtcctggaggaaacaggtttc
gatgtttcaatgcttcttaacaaagatgactacattgaactgatatttggacagcagagg
gtgcggctctacataattgccggtgtcagagataatactgcctttgcccctcaaacaaaa
aaggagattagtgaaattgcatggcatcggcttgatgatcttcagcctgctagtgaagat
gtgatatcccatggggtcactggtctaaagctttacatggtggctccttttttggcatct
ttgaaaaaatggatttcagcacataagccccctatttctccaaaccctgatatgcctctc
aaagggatctgtgtgtggaaagcgaagagcagttctataggaagtaacacaatgattctg
gagaatcaatcaactaaacctgcaactgattctcatcctcctgacacaggcccaggcaca
agcttcaggaacttcagattcaatactgctgctatcttgcaagcaatggaagctggtttt
tcaaattaa
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