KEGG   Mangifera indica (mango): 123228084
Entry
123228084         CDS       T07684                                 
Name
(RefSeq) DNA damage-binding protein 1a
  KO
K10610  DNA damage-binding protein 1
Organism
minc  Mangifera indica (mango)
Pathway
minc03420  Nucleotide excision repair
minc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123228084
  09124 Replication and repair
   03420 Nucleotide excision repair
    123228084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:minc04121]
    123228084
   03400 DNA repair and recombination proteins [BR:minc03400]
    123228084
Ubiquitin system [BR:minc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     123228084
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123228084
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123228084
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A
Other DBs
NCBI-GeneID: 123228084
NCBI-ProteinID: XP_044509221
LinkDB
Position
10:12461669..12472701
AA seq 1088 aa
MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVFDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDSKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFAEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SANTFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
FISETRILAMNLEDELEETEIEGFCSQAQTLFCHDAVYNQLVQVTSSSVRLVSSTSRELR
HEWKAPAGYSVNVATANATQVLLATGGGHLVYLEIDDGTLTEIKHAQLEYEISCLDINPI
GENPNYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFLLNMNTGELTDRKKVSLGTQPITLRTFSSKSTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFAICSLKNQSSADESEMHFIRLLDDQTFEFMSTYPLDTFEYGCSILSCSFSDDS
NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN
QKIQLYKWMLRDDGSRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG
EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQSNLRKVI
KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRMDEISKTMNVSVEELCKR
VEELTRLH
NT seq 3267 nt   +upstreamnt  +downstreamnt
atgagtatatggaactacgtcgttacggctcacaagcccaccaatgttactcactcttgt
gtcggcaatttcaccagccctcaggagctcaatctcattattgcgaaatgcactcgtatt
gaaatacatttgcttactcctcagggactgcagcctatgttggatgtacccatatacgga
agaattgcaactcttgaactttttcgccctcatggtgaagcacaggattttctattcatt
gcaactgaaagatacaaattctgtgttctccagtgggatgctgagtcctctgagcttatt
acaagagcaatgggagatgtctttgatcgtataggccgtcctacagataatggtcagatt
ggcataattgatcctgattgtagattgattggactccatctgtatgatgggttgttcaag
gttattcctttcgatagtaaaggacagctaaaggaagcctttaatattaggcttgaggag
cttcaggtcttggatatcaagtttctttatggttgttcaaaaccaacaattgtagtgctc
taccaggataataaagatgctcgtcatgtcaaaacgtacgaggttgctctgaaagataaa
gattttgctgagggcccgtggtcccagaataatttggacaatggagctgatttgttgata
ccagtacctccacctctctgtggtgttcttataattggagaagaaacaattgtctattgt
agtgctaatacttttaaagcaattccaataagaccatctatcacaaaagcctatggaaga
gttgatgctgatggttctaggtatctacttggtgaccatgctggcctgcttcacctgctg
gtcataacccatgagaaagagaaggtcactggactaaaaattgagctgttgggcgaaaca
tctattgcatctactatatcatatttggataatgcatttgtgtatattggctcaagctat
ggagattcacagcttataaagctaaatctacaacctgatgcaaagggttcatatgtggaa
gtattagaaaggtatgtcaacttggggcccattgttgacttctgtgtggttgaccttgag
aggcaaggccaaggtcaggttgtaacatgctctggagcttacaaggatggttctcttcgc
atagttcgaaatgggattggaataaatgaacaggcatcagtggaattgcaaggtattaaa
gggatgtggtctttgagatcatccaccgatgatccatttgataccttcctggtggttagt
tttatcagtgaaacacggattttagcaatgaatctggaggatgagctggaagagactgag
atagagggtttttgttctcaagcacagactttgttttgccatgacgctgtttacaatcaa
cttgttcaggttacttctagctctgtaagacttgtaagttcgacatctagggagctgcgc
catgaatggaaagctccagcaggatattcagttaatgttgcaactgccaacgctactcag
gttttactggcaaccggaggtgggcatttggtttatttagaaattgatgatggaacattg
acagaaataaaacatgcacaactggagtatgagatatcatgccttgacattaatccaatt
ggtgagaaccccaactatagtcagatagctgcagttggaatgtggacagatataagtgtt
aggatattctcacttcctgacctaaatctgatcactaaggagcatctgggtggagaaatc
atacctcgatctgttcttctctgtgcctttgaagggatatcttacttgttatgtgcactt
ggagatggtcatcttttaaattttttgttgaacatgaatactggtgagttgacggatagg
aaaaaagtgtcgctgggaacccaacctattacactccgtactttctcatccaagagtacc
actcatgtatttgctgcatcagatagaccgacagtgatttatagcagtaacaaaaagcta
ctttatagtaatgtaaatttgaaagaagtcagtcatatgtgccctttcaactctgctgcc
tttccagacagccttgcaattgcaaaagaaggtgagcttactattggcacaattgatgat
atccagaagcttcatatccgctctatacctcttggggagcatgcacgccgtatctgtcat
caagagcagtcccggacttttgctatctgtagtttgaagaaccagtctagtgcggatgaa
tctgaaatgcacttcatccgcttgttagatgaccaaacatttgagtttatgtcaacttac
ccacttgacacatttgagtacggttgctccatcctcagctgctctttctctgatgatagt
aatgtttattactgtgttgggactgcctatgttctgccagaagaaaatgagcctaccaag
gggaggatattggttttcatagtggaggatgggaagttacagctgattgcagagaaggaa
actaagggagcagtttattcattgaatgccttcaatggtaaattgcttgcagctatcaat
caaaaaatccagttatacaagtggatgctccgagatgatggtagtcgggaattgcaatct
gaatgtggtcatcatggtcacatacttgccctctatgtacaaactcgtggagatttcatt
gttgttggtgatttgatgaaatctatttccttgctaatctacaagcatgaagaaggtgcc
attgaagaacgggctcgtgactacaacgcaaattggatgtcagccgttgaaattcttgat
gatgacatataccttggtgctgaaaacaactttaacctctttacagttaggaagaatagt
gaaggtgccactgatgaggagagaggccgccttgaggtggttggtgaataccacctggga
gaatttgtgaatcgatttcggcatggttcccttgtgatgcgattgccagattctgatgtg
ggtcagattccaactgtgatatttgggacggtgaatggtgttattggggttattgcttca
cttcctcacgagcagtaccttttcttagagaagctgcagtcaaacttaaggaaggtgata
aagggtgtgggagggttgaatcatgagcaatggagatcattcaacaacgagaagaaaaca
gtggatgcgaaaaatttcctggatggtgatttaatagagtcgttccttgatctgagccgt
agtcggatggatgaaatttcgaagacgatgaatgtttcagtagaggagctgtgtaagaga
gttgaggaactcactaggttgcattga

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