Mangifera indica (mango): 123228259
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Entry
123228259 CDS
T07684
Name
(RefSeq) DDB1- and CUL4-associated factor 8-like isoform X1
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123228259
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123228259
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
EIF3I
Beta-prop_EIPR1
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_VPS8
VPS8_N
Beta-prop_HPS5
PQQ_2
Beta-prop_TEP1_C
PPP4R2
Motif
Other DBs
NCBI-GeneID:
123228259
NCBI-ProteinID:
XP_044509539
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Position
10:complement(1967708..1971534)
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AA seq
517 aa
AA seq
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MSKSTRPRAILDSTATVVDVFQRELGLLSTRNFEYRRRASEDLVLRLDICKKLDKHRGCV
NTLSFNADGDILVSGSDDRRVILWDWVTGRVKLSFHSGHDDNVFQAKIMPFADDRSIVTC
AADGQVRHAQILEGGGVETTLLAKHQGRAHKLAIEPGSPYIFYTCGEDGSVQHIDLRTGV
ATELFSCCSIGGGRSYMPVANLNAIAIDPRNPNLFAVAGYDEYTRIYDIRKYKWDGSTDF
GQPSNYFCPPNLIGNDEVGITGLAFSDQSELLVSYNDEFIYLFTQDMGLGANLVRSSPLS
TGSDASEMASAYSSSPTMDVGDIVTPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRI
FIWKKKGGELIRVMQADKHVVNCIEPHPYTTVLASSGLESDVKIWTPEAIERATLPAKIE
QVLPDRIHWIALGDDDDDDDYYFYDIDDDDNDDDNDDDDGDADENDDDDDDDNDYDDDDI
ENENDDYDDDYSVEDVNDVDDGDEWCDDDDGSAKVDG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagagcaccagacccagagccatcctagactctacagccacagtggtcgatgtt
ttccaacgcgaactcggccttctctccacccggaactttgagtaccgccgccgtgcctcc
gaggatcttgtccttcgacttgatatttgcaagaagcttgataaacatcgaggttgtgtg
aacacattaagcttcaatgcggatggtgatattctggtgtcaggctctgatgacaggcga
gttatactctgggattgggtaactgggcgtgtcaaactttcattccattctggtcatgat
gacaatgttttccaggcgaaaatcatgccatttgcagatgatcgcagcattgttacctgt
gctgctgatgggcaggttcgtcatgctcaaattctggaaggcggtggagtagagactact
ttgcttgccaaacaccaaggacgggcacataaattggctattgaacctggaagcccttac
attttttatacttgtggtgaagatggatcggtgcaacatattgatttgagaactggggtt
gctactgaacttttcagttgctgctcaattggtggtggaagaagttacatgccagtagca
aatctaaatgcaattgcaatcgacccaagaaatccaaatctctttgcagtagctggatat
gatgagtatactcgaatttatgatattcgcaagtataaatgggatggttctacagatttt
ggtcagccttctaattacttttgccctcctaatttgattggtaatgacgaagttggaata
actggcttggccttctcagatcagagtgagcttttggtttcatataatgatgaattcatc
tatctatttactcaggatatgggattgggggctaacctggtacgctcctctccattgtct
actgggagtgatgctagtgaaatggcatctgcttattcctcatctccaacaatggatgtt
ggtgatatagttactccccaagtttacaagggccacagaaattgtgtgacagtgaaaggt
gtgaacttctttgggccaaaatgtgaatatgtggtcagtgggtctgactgtggtcggata
ttcatttggaagaaaaagggtggagagctcatccgtgtcatgcaagcagataagcatgtg
gtaaactgtattgagccacatccttacaccacagtgcttgctagcagtggacttgaaagt
gatgtcaagatatggacccctgaggctatcgagagagctactttacctgcaaagattgaa
caggttttacctgatcgtattcattggattgcacttggtgatgacgacgatgatgacgat
tattatttttatgatattgatgatgacgacaacgacgacgacaatgatgacgatgatgga
gatgctgatgaaaatgatgatgatgatgatgatgacaatgattacgatgatgatgatatt
gagaatgaaaatgatgattatgatgatgattacagcgtggaagatgtcaatgatgtagat
gatggcgatgaatggtgtgacgatgatgatggaagcgctaaagttgatggctaa
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