Mangifera indica (mango): 123228374
Help
Entry
123228374 CDS
T07684
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123228374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123228374
Spliceosome [BR:
minc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
123228374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
123228374
NCBI-ProteinID:
XP_044509686
LinkDB
All DBs
Position
10:complement(10153749..10159175)
Genome browser
AA seq
563 aa
AA seq
DB search
MSRKRENGDSGNEDGYSKRLKVAAEQSSPSPSPLGFENPLLPLANTYDDDEEDEEEIGRR
VLSGGSSRAKDEQYGYGVQEDGNEDEDGRDDQGVGQGKRSRVVEVRRDCPYLDTVNRQVL
DFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLP
DGYEINDPSLDDIRHVLNPRFTKDQVEQLDKKKLWSRALDGSDYLPGMVGLNNIKETDFV
NVTIQSLMRVTPLRNFFLIPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAV
MKASKKRFRIGAQSNPVEFMSWLLNTLHADLRTTKKNTSIIHDCFQGELEVIKEIPGNAI
SEKKENGDDLNAAQITDGGSEQNTIMKETSRMSFLMLGLDLPPPPLFKDVMEKNIIPQVP
LFNILKKFDGEMVTEVVRPRVARMRYRVTRLPQYLILHVRRFTKNNFFVEKNPTLVNFPV
KNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEEGFYRVFVQRKSEELWYEVQDLH
VSETLPQMVALSEAYMQIYEQQQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaagagggaaaatggtgatagtgggaatgaagatgggtactcaaagaggcta
aaagtggcagcagagcagtcgtcaccatccccttctcctcttggatttgagaacccgcta
ttaccattagctaacacgtatgatgatgatgaggaggatgaggaagaaattggaaggagg
gtgcttagtggaggatccagtagagccaaggatgaacaatatggttatggagttcaagaa
gatgggaatgaggatgaggatggccgtgatgatcaaggggttggtcaagggaaacgaagc
agagtcgttgaagtaaggcgggactgtccttatctagatactgttaatcgtcaggtgttg
gattttgattttgagaagttttgctctgtttctctgtcgaacttgaatgtgtatgcatgc
ttggtttgtgggaagtattatcaaggaagaggacagaagtcccatgcatatactcatagt
ttggaagcaggacaccatgtctatatcaaccttcgaacagagaaagtttactgccttccc
gacggatatgaaattaatgatccatcattggatgatattcggcatgtgctaaacccaagg
tttaccaaggatcaagtagaacagcttgacaaaaagaagctgtggtctagggcgttggat
ggttcagactacctgccaggaatggtgggtttgaataacattaaggagactgattttgtg
aatgtcacaattcaatccctaatgagagttactccattaagaaatttctttcttatcccg
gaaaactatcaacactgcaaatctccacttgttcatcgatttggagaactcacaagaaag
atttggcatgcccgaaacttcaaaggacaggtgagtccacacgagtttctgcaagcagtt
atgaaagccagtaaaaaacgttttcgtataggtgcacaatccaatcctgttgagttcatg
tcatggcttcttaacacactgcatgcagatcttagaacaacaaagaaaaatactagtatc
atccatgactgctttcagggggaattggaggttataaaggagattcctggtaatgcaatc
tctgagaagaaagaaaacggtgacgatctgaatgctgctcagataactgatggtggaagt
gaacagaatactattatgaaggaaacttctagaatgtcgttcctgatgcttggccttgat
ttgccaccaccacctcttttcaaagatgtgatggaaaaaaatatcatacctcaggttcca
ttatttaatatattgaagaagtttgatggggaaatggtgactgaggttgttcgtcctcgt
gtggctagaatgagatatcgtgtcacaagattaccacaatacttgatccttcacgtgcgg
cgcttcacaaagaataatttttttgtggaaaaaaatccaacacttgtcaattttcctgtg
aaaaatttggaattgaaggactacatacctttgccaacaccgaaagagaatgaaaaattg
cgttccaagtatgatttgattgccaatattgttcatgatggtaaacctgaggaggggttc
tacagggtttttgtgcagcggaagtcagaagaattatggtatgaggtgcaggatcttcat
gtttcagaaactcttcctcaaatggttgcactctctgaggcatatatgcagatatatgag
cagcagcaatag
DBGET
integrated database retrieval system
