Mangifera indica (mango): 123228523
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Entry
123228523 CDS
T07684
Name
(RefSeq) coatomer subunit alpha-2-like
KO
K05236
coatomer subunit alpha
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123228523
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
minc04147
]
123228523
Membrane trafficking [BR:
minc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
123228523
Exosome [BR:
minc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123228523
Exosomal proteins of bladder cancer cells
123228523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WD40_Gbeta
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
NBCH_WD40
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
ENTH
Beta-prop_WDR19_1st
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
123228523
NCBI-ProteinID:
XP_044509861
LinkDB
All DBs
Position
11:1606692..1610409
Genome browser
AA seq
1203 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHCKRPWILASLHSGVIQMWDYRMGTLVDRFDEHDGPVRSVQFH
RSQPLFVSGSDDYKIKVWNYKLHRCLFTLTGHLDYVRTVEFHQEYPWIVSASDDQSIRIW
NWQSRTCLSVLTGHNHYVMCALFHPIDDLIVSASLDQTIRVWDIMRLKQLGRMNNDLFGG
FDAVVKYVLEGHDRGVNWASFHPTLPLIVSAADDHQVKIWRMNDSKAWEVDTLRGHINNV
SCAIFHARQDIIVSNSEDRSIRIWDATKRTCVQTFWREHDRFWILASHPEKNLLAAGHDN
GLIVFKLERERPAFSVSGDYMFHVKDRFLRCYKFSTQTDGQVILIRRPATTSLTPVARRL
SYNPTENAVLICSDVDGGSYELYTIPKESYGMGEMIQEVKRGMGGSAVFVARNRFAVLDK
SCNQVLLKNLKNEIVKRIVLPVIVDVIFYAGTGSLLCRTDDRVFIFDLQQRIILAELQTL
FVRDVVWSNDMENVALLCKHSIGIASKKLVHQCILCETVRIKSGAWDENGVFIYTTLNHI
KYCLPNGDSGIIRTLDAPVYITKVSRDNIYCLDRDGKNHAIVIDATEYLFKLSLLKKRYD
LVMGMIRSSNLCGQAMIAYLKQKGFAEIALHFVKNERTRFNLALESGNIQIAVAAAKEID
EKDYWYQLGIEALRQGNAGIVEYAYQRTRNFERLSFLYLVTGNLDKLSKMLKIAEVKNDV
MGQFHNAIYLGDIRERIKILENTGHLSLAYATAAVHGIRDKAESLAAELGDNVPSLPTGK
TLSLLKPPSPILCGGDWPLLRVMRGIFAGGLDNVGRNVQEEDEEPAGADWGEDLEFLDVE
NMSNADINLALEDEEKIEENEAGGWELEDLDLPPMTDTSEASSHANSSVFIAPTPGMPLT
QIWTQKTSLAAEHTAAGNFHVAMHLLNRQLGIKNFAPLRPLFLELNMGSQSYLHAFSSAP
VISVALSRGGNELASVRGPPALVFKFSQLVEKLKAGYKAFSMKKLPEASQLFLSILHTIP
LIVVDSRREVDEVKELITKVKIYVLGLKMELKKMEMKDNPVRQQELATYLTLFDLLLNHS
RIALVNATVACYKAGNFSAATSFARRYFETNPTIESQIKICRQILKASEKKTDANQLNYD
FRNPFVVCGATYEPIYEGQKDVSCPYCSSKFVPSQKGQLCSVCELAEIGSDASGLLCSSS
QIR
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaaattcgagacgaagagtaacagagtgaagggtctgagttttcactgcaag
aggccatggatcttggctagtcttcacagtggggtgatccagatgtgggattacaggatg
ggcacgttagtcgatcggtttgatgagcacgatggacccgtccggagtgtccagtttcac
aggtctcagcctctgtttgtttcaggaagtgacgattataaaatcaaggtgtggaattat
aaattacacaggtgtttgtttactcttactggccaccttgattatgttcgaaccgttgaa
tttcatcaagaatatccttggattgtcagtgccagcgatgaccaaagtatcagaatttgg
aactggcaatcacgtacctgtctttctgtactaaccgggcacaatcattatgtaatgtgt
gcattgtttcatcctattgacgacctgattgtttcagcgtccctggatcaaacaattcgt
gtgtgggatatcatgcgattgaaacaattaggccggatgaacaacgatttgtttggcggg
tttgatgcagttgttaagtatgttttagagggccatgatcgaggagttaactgggcatct
ttccatcccactcttcctttaattgtctcagcagccgatgatcaccaagtcaaaatttgg
cggatgaatgattcaaaggcttgggaagtggacactttgagagggcacataaacaatgta
tcgtgtgctatattccacgccaggcaggatattatagtgtccaattcggaagataggagt
attcgtatttgggatgctacaaagaggacttgtgttcagactttttggagggaacatgac
aggttttggattctcgcatcacatcccgagaagaatttacttgctgctggacatgataat
gggttgattgtttttaaattggagagagaacggcctgctttttctgtgagtggtgattat
atgtttcatgtcaaagatcgattcctgcgctgttacaaattctcaactcagactgacggt
caggtaatcttgattagaaggcctgctactactagcttaactccagtggcaagaaggctt
tcttataaccctactgagaatgctgttttaatctgttctgatgtggatggggggtcctat
gaactttacactatacctaaagaaagctatggcatgggtgagatgattcaggaggtgaaa
agaggtatgggaggatcagctgttttcgtggctcgaaatcggtttgctgttttagataag
agctgcaaccaagttcttctcaagaaccttaagaatgagattgtaaagaggattgtgctt
cctgtcattgtggatgtaatattttatgctggaactggaagcctgctgtgcagaacagat
gacagagtgtttatttttgatctccagcagaggattattcttgcggagcttcaaacactt
tttgttagggatgttgtttggtcaaatgatatggagaatgttgctttgttgtgcaaacat
tcgatagggatagccagtaagaagcttgtgcatcaatgtattctctgtgagacagtcagg
ataaaaagtggagcttgggatgagaatggtgtcttcatatatactactctgaatcacatc
aaatactgccttccaaatggagacagcggaattatcaggactcttgatgccccagtttac
ataacgaaagtttctagagacaacatatattgtttggaccgagatgggaaaaatcacgcc
attgtcattgatgctactgaatatctcttcaagctgtctctcctgaagaagagatacgac
ctggttatgggcatgattaggagctcgaatctatgcgggcaagccatgattgcatatctg
aagcagaaaggtttcgcagagattgctcttcattttgtgaagaatgagagaacacgtttt
aacttggcattggagagtggtaacatccagatcgctgttgctgctgcaaaggaaatcgat
gagaaagattattggtatcaattgggcatcgaggccctgcgacagggaaatgcaggcatt
gtggaatatgcataccaaaggacaaggaactttgagaggctatcttttctctatcttgta
actggaaatttagataaattgtccaaaatgctgaaaattgctgaagtcaagaatgatgta
atgggtcaattccacaatgccatctatttgggtgatatcagggaacgcataaaaattttg
gagaacactggccatttgtcccttgcttatgctacagctgcagttcatgggattcgagat
aaagctgagagcctggcggccgagctgggagataatgtcccttctctgcctactgggaaa
acactgtctttgttgaaaccaccaagtcctatcctgtgcggtggagattggcctttgttg
agggtcatgagaggtatatttgcgggtggtcttgataatgtgggcagaaatgtgcaggaa
gaggatgaagaacctgcaggcgctgattggggggaggacttggaatttctggacgtcgaa
aacatgtcaaatgcagatatcaatttggcattggaggatgaagaaaagattgaagaaaat
gaagcaggaggatgggagcttgaggatcttgatcttccacccatgactgatacttcagaa
gcttccagccatgccaattcttcggtattcattgccccaactcctggaatgcctttaact
caaatttggacacaaaaaacatctctagctgctgaacacactgccgctggcaattttcat
gttgctatgcacttgctaaacaggcaacttggtataaagaactttgctccattgagacca
ttatttctcgaactgaacatgggcagccagagttatcttcatgccttctcttcggctcca
gtaatatctgtggcattgtcaaggggaggcaatgaattagcaagcgtacgaggcccgcct
gcccttgtgttcaaattctctcaacttgtagagaagcttaaagccggctacaaagcattt
agtatgaagaaattaccagaggcctcacaacttttcctgagcattctccataccattcct
ctgattgttgttgattcaagaagagaggtagatgaagtaaaggaattaattaccaaagta
aaaatctatgttcttggtcttaagatggagctcaagaagatggaaatgaaagacaaccct
gttcgccaacaggagctggcgacctatttaaccctcttcgaccttctgctaaaccacagt
agaatagcattggtaaatgccacggttgcatgctataaggctggaaatttcagtgcagcc
accagctttgccaggcgatactttgagaccaatcccaccattgaaagccaaataaaaatc
tgcaggcaaatcttaaaagccagtgagaagaagacggacgcaaaccagctgaattacgat
tttagaaatccttttgtagtctgtggagcaacatatgagcctatatacgaaggacaaaag
gatgtgtcatgcccttactgcagttcaaagtttgttccatcccagaaaggacagctttgt
tctgtttgtgagcttgcagaaattggttctgatgcatctggattgctctgttcttcttcc
cagataagatga
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integrated database retrieval system
